Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0642 ATGTTAATCACTTCCAACTACCGAACGCCTCGCCGTGCTCGTTGTTTCATGGAACAGCATTCGGTTCAACGAATCGTCGTCGTTTGTGTAACCGTCTCCTTGTTCTCCCTCTCACTCCTTGCCGTTTCAACAGGTTTGGCTGGTGGGAGGACACTTTCGGGAACCATGGTCTCCGTGTCATCGCGTCGTGTACAGGAAGGGAACAAAAAGCTCCATAGCTCGCATCGCAAACTTCTTACTAGTGGGAATGGAAAGATGGAACCGAACCGAATATGGGGTGAGAAATGCAGCAAGTCTGATATAGTGATAAACCAGGGCCCCACGGCCCCACTCCCAAGTGGCATTCCCACATACACGGTGGAGATCATGAACATGTGCGTGAGTGGATGCGACATCTCTGGCATTCACCTGAGGTGCGGCTGGTTCAGCTCTGCACGCCTCATCAACCCCAAGGTCTTTAAGCGCCTCCGTTACAACGATTGCCTCGTCAATGATGGCAGACCCTTGATCAACGGCGCCACCATTTCATTCCAATATGCCAACACCTTCCTCTACCCTCTTTCCGTTTCCTCTGTCATCTGTGTCTGA 588 0.517 MLITSNYRTPRRARCFMEQHSVQRIVVVCVTVSLFSLSLLAVSTGLAGGRTLSGTMVSVSSRRVQEGNKKLHSSHRKLLTSGNGKMEPNRIWGEKCSKSDIVINQGPTAPLPSGIPTYTVEIMNMCVSGCDISGIHLRCGWFSSARLINPKVFKRLRYNDCLVNDGRPLINGATISFQYANTFLYPLSVSSVICV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0642 195 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 23 195 IPR040361 -
Vra5g0642 195 PANTHER PROTEIN TAPETUM DETERMINANT 1 23 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0642 Vra-Chr5 9901211 9903812 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0642 - - vun:114195900 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0642 5 9901211 9903812 Vra5g0642 5 9901211 9903812 ECH