Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0637 ATGGCCATTCATCACCAAACTTTGGCTTTCATTTTCGGCCTTCTAGGAAACATCATCTCCTTTATGGTGTTCCTCGCTCCACTACCGACTTTTTACCAAATATACAAGAAAAAGTCTACGGAGGGGTTTCAATCACTACCTTATATTGTTGCATTGTTCAGTTCAATGCTCTGGATTTATTACGCTTTCGTAAAAAGGGAGGGCACCCTCCTTCTCATTACTATTAACTCCTTTGGATGTGTCATAGAGACACTCTACCTTGCCATCTTCTTAATTTATGCACCCAGAAAAACTAGGCTTTCAACCTTCATGATTATTTTCTTGTTGGATGTTTTTGGGTTCGGAGGCATGCTTCTTTTAACTCTCTTCCTAACAAAAGGATCCAAACGCCTTAAAGTGATTGGATGGATTTCTCTCGTTTTCAATATAAGCGTATTTGCTGCTCCTCTCGGGATTATGAAACGTGTGATAAAGACGAAAAGTGTGGAATTCATGCCTTTAAGTTTGTCCTTCTTTTTGACCTTAAATGCTATCATGTGGTTCTTCTATGGCCTTCTCCTCAACGACTACTACATCGCTCTCCCAAATACACTAGGTTTTCTATTCGGCATAATTCAGATGGTGCTGTATTTGATTTATAGAAACCCCAAGACAAATAAGGTAACGAAATTGCAAGAACCAAATAGTCATGAGATTATTGATATTGGGGAACCGTCTGAGCTGAATCATGTAAGCAGTGGTGCTGTGACTGAGATTGCTACTGAGGATCCAAATAGAAGAGAAGAAGGAAATGGAAACCCTAAGAACACCATGGATTCCCATAGCAATATGTGA 834 0.3957 MAIHHQTLAFIFGLLGNIISFMVFLAPLPTFYQIYKKKSTEGFQSLPYIVALFSSMLWIYYAFVKREGTLLLITINSFGCVIETLYLAIFLIYAPRKTRLSTFMIIFLLDVFGFGGMLLLTLFLTKGSKRLKVIGWISLVFNISVFAAPLGIMKRVIKTKSVEFMPLSLSFFLTLNAIMWFFYGLLLNDYYIALPNTLGFLFGIIQMVLYLIYRNPKTNKVTKLQEPNSHEIIDIGEPSELNHVSSGAVTEIATEDPNRREEGNGNPKNTMDSHSNM* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0637 277 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Vra5g0637 277 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Vra5g0637 277 Gene3D - 129 225 - -
Vra5g0637 277 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 247 - -
Vra5g0637 277 PANTHER RAG1-ACTIVATING PROTEIN 1 4 247 - -
Vra5g0637 277 MobiDBLite consensus disorder prediction 252 277 - -
Vra5g0637 277 Gene3D - 10 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0637 Vra-Chr5 9796347 9800010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0637 1 257 Miscellaneous Gene Families AT5G50800 55.000 7.83e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0637 K15382 - gmx:100794434 411.764