Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0576 ATGTTAGCAACTGAACATTTTGCCTTTTTTTTGTTTGTGGAGCATTTAGAGAGAGACGCCATGGTTTCTTCCAACGGACAAGCTACTACACAACCACGTTTTTCTTTTGGATTGATTTCTGATGTTCAATATGCGGATATTTCTGATGGTCGCTCATTCCATGGTGTTCCACGGTATTATAGGCACAGTATTCTAGTGTTGCAGAGAGCGGTTAAAGAATGGAATACTCATCAGAAGCATATGTTTGTGCTTAATTTTGGAGATATTGTTGATGGGTTTTGCCCCAAAGATCAATCTCTTGGTGCTGTACAGAAAGTTGTGGACGAATTTGAGAAGTTCAAGGGGGGACCTGTGTATCATATGATTGGAAATCACTGCCTATACAATCTCCCTCGCAGCCAGCTGCTTCCGTTATTGAAGATCCAAAGTCTTGATGGCCGTGCATACTATGATTTTTCACCGGTGCCTGAATATAGATTTGTAGTTCTGGATGCCTATGACATCAGTGCCATTGGTTGGCCACAAGATCATCCCAAAACATTGGAAGCCATGAAAATCCTTGGGGAAATGAATCCAAATGAAGATAAGAACAGTCCAGATAATTTGGAGGGGCCTGAAAGAAGGTTTGTGATGTTTAATGGAGGTCTTGGAAAGGAACAGATAGAATGGTTAGATGGTGTTCTCCTGGATGCGACAATATTGAATCAGAAGGTGATTGTCTGTTGCCATTTGCCTCTAGATCCTGGTGCGGCAAGTAAAGCAACACTGTTGTGGAATTATGATGAAGTAATGAATGTGATACACAGATATAATTGCGTTAAGGCCTGTCTTGCAGGGCATGATCATAAAGGTGGATACTCCATTGATTCTCATGGGATACACCACAGAGTTTTTGAAGCTGCTTTGGAATGTCCTCCTGCTACCAATGCATTTGGATACATTGATGTCTACGACGACAGGCTATCACTAATCGGAACTGACAGAATGGAAAGTACAGACATGCATTTTAGCCCCTCAAGTTAA 1023 0.4164 MLATEHFAFFLFVEHLERDAMVSSNGQATTQPRFSFGLISDVQYADISDGRSFHGVPRYYRHSILVLQRAVKEWNTHQKHMFVLNFGDIVDGFCPKDQSLGAVQKVVDEFEKFKGGPVYHMIGNHCLYNLPRSQLLPLLKIQSLDGRAYYDFSPVPEYRFVVLDAYDISAIGWPQDHPKTLEAMKILGEMNPNEDKNSPDNLEGPERRFVMFNGGLGKEQIEWLDGVLLDATILNQKVIVCCHLPLDPGAASKATLLWNYDEVMNVIHRYNCVKACLAGHDHKGGYSIDSHGIHHRVFEAALECPPATNAFGYIDVYDDRLSLIGTDRMESTDMHFSPSS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0576 340 Pfam Calcineurin-like phosphoesterase 35 283 IPR004843 GO:0016787
Vra5g0576 340 PANTHER - 21 339 - -
Vra5g0576 340 CDD MPP_Nbla03831 34 323 IPR041869 -
Vra5g0576 340 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 21 339 - -
Vra5g0576 340 Gene3D - 29 329 IPR029052 -
Vra5g0576 340 SUPERFAMILY Metallo-dependent phosphatases 32 333 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0576 Vra-Chr5 7539347 7541030 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0576 K01517 - gmx:100792911 588.571