Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0574 ATGCAAGACGCAATTGGGATTCCAGCTTGCTTCTCTTCCGCTTTGACATCAAGTGATGATCACACAACCGTCACCCGTTCAGGCCAGAGCGTGCACATGTCCGTCTACAGAACAAAGATTGCTGATCACTGCCGCTTGATCACCATCACATGGTGCAAAAACTTGATGCTCCATGGCCTCTCAGTCTCAGTGGAAGGCCCAGAGGGGGAGGCACAGTACAGCTGCAAGGTGGAGCTCAAACCATGGTACTTTTGGAGAAAACAAGGTTCCAAGCGCTTCCTCGTACACGGTAACAAAGCCGTTGACGTTTTCTGGGACCTTAAGGCTGCGAAATTCAACGGCGAGACGGAACCAACCTCGGAGTACTACGTTGCAGTGGTGTGCGAGCAAGAGGTGGTACTCCTGGTGGGTGATTTGAGGAAAGAAGCGTACAGAAGAACCGGGTGCAGACCAGCACTGATTGACCCGATTCTGATTTCGAAAAAAGAGCACATCTTTGGGAAGAGAAAGTTCTCAACAAGAGCGAAGTTTGAGGAGAAGGGTAGGTGCCATGAGATCTCAATCGAGTGCAAGAACAAAAGCGACATTGGAGGGGAATCGGCGTCAAATGGGATTCAAGTTCAGCCAGAGATGGAGATAAGATTGGACGGGCACGTGATGATCCATGTGAAGCACTTGCAGTGGAAGTTCAGAGGGAACGAATCAATTCATCTAAACAAGATGAGAGTGGAAGTGTATTGGGATGTGCACGATTGGCTCTTTAGTCCTGGTTTGAAACACGCTTTGTTCATTTTTAAACCTGTTTTATCATCCATGTTGTCTATGTCTGCGTCATCATCTTCGCCACCGTTATCGTTGTCGTCAACATCCACACCATTATCGACTCAAACGGGGAGCTCTGGATCCTTGGAGGGGTTCAGTGTGAACGAATCATCAGAATTTTTCTTGTTTCTATATGCTTGGAAGGTTGAGTAA 975 0.479 MQDAIGIPACFSSALTSSDDHTTVTRSGQSVHMSVYRTKIADHCRLITITWCKNLMLHGLSVSVEGPEGEAQYSCKVELKPWYFWRKQGSKRFLVHGNKAVDVFWDLKAAKFNGETEPTSEYYVAVVCEQEVVLLVGDLRKEAYRRTGCRPALIDPILISKKEHIFGKRKFSTRAKFEEKGRCHEISIECKNKSDIGGESASNGIQVQPEMEIRLDGHVMIHVKHLQWKFRGNESIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPVLSSMLSMSASSSSPPLSLSSTSTPLSTQTGSSGSLEGFSVNESSEFFLFLYAWKVE* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0574 324 PANTHER OS01G0909400 PROTEIN 1 324 - -
Vra5g0574 324 Pfam Plant protein of unknown function (DUF868) 27 322 IPR008586 -
Vra5g0574 324 PANTHER EXPRESSED PROTEIN 1 324 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0574 Vra-Chr5 7508776 7510649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0574 7 324 EF-hand Containing Proteins AT5G28150 38.390 2.58e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0574 - - gmx:100816323 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0574 5 7508776 7510649 Vra5g0574 5 7508776 7510649 ECH