Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0561 ATGGAATTTGCAGTTGCAGAGAATCTTGGAGTAAGAGGACACGTGGTGGCCATGCCTTACCCTAGCCAAGGACACGTAAACTCCATGATCAACCTCTGCAACCAGCTTGCTTCACTTCAAGCTTCCATTCTCATCACCATTGTCGTCACACAAGAGTGGCTTGGCTTAATCGCCTCCCACCCAAAGCACACCAACATTCGCTTCGCCACCATCCCCAACGTTGTCCCTCTCCAATCTCAGATTGCCTCCGACATCACTGCTTTCTTCCAAGCTGCCGTCACCAACCTCCAACCTCCCTTCTGCCGCCTCCTCCACCGCCTTCACCCCGCCGTCACCGCCCTCCTCGCCGACGTCGAGCTGCAATTCCCAGTCGCCGTCGCACGCCTCATGGATATCCCGGTCGCGCTGCTTTGGACCATGTCGGCTTCCTTTTTCCTCAGCTTAGATCAACTACAAAAGTTGGTTCGTAATGGAGCTTTGAAGGCTGATCTTTTAGATGATTGTGAAGAGCATATATCAGGAATTTCTCCGGCACAATTGGCTGATCTTCGAACGGTGCTTCGTGAGAATGACTTGAGGTTTTTGCAAATTGAGATGGAATGCATTTCAGAAGTGTCCAAAGCAGATTGTCTTATAGTTAATAGTGTTGAAGGGTTGGAAGCTGAGGCGATTGGTTCTTTGAGAGCCATGTTGCACTTTCCAATTTATCCTATTGCCTTCCCATACTTCAAACCTGAAGCAAATCATTTAGTTTCCTATAGTGATTACAAGTTTGACTACTTAAATTGGTTAGACTCTCAGGCAGCTATGTCAGTATTATACATTTCTCTGGGTAGTTTCCTCTCTGTGTCTTGTGCCCAAATGAATGAGATTGTTTCTGCTTTAGAAACGAGTGGTGTTCGTTATTTGTGGGTGGTTCGTGGTGAAGTTTCCTGGCTAAAAGAGAAATGTGGGGATAGGGGAATAGTGGTGCCATGGTGTGACCAATTGAAGGTTTTGTCACATCCTTCTGTAGGTGGATTTTGGACCCATTGTGGGTGGAATTCCACTATGGAAGCTGTTTTTGCTGGTATTCCAATGCTCACATTCCCTCTTTTCTTTGACCAAGTCCCAAACAGTAGACAAATTTTGGAAGTGTGGAAGAATGGGTGGGAGTTAAAAAGATCAGTGCTGGGAAGTGAAGAATTCATAGCACAAAAAGAAATATTGGAAGTTATTGAAAAGTTTATGGATGTTGTAAAGGGTAAAGAACTTCGAGAGAGAGTCCTAGAACTTAAGGGTATATGTGACCAAGCAGTTGCTGAAGGTGGATCCTCCAATATCAACCTCAATGCACTTATGAAAGATGTTTTGTGTGTTCAAGGTATTTATGCATGA 1377 0.4517 MEFAVAENLGVRGHVVAMPYPSQGHVNSMINLCNQLASLQASILITIVVTQEWLGLIASHPKHTNIRFATIPNVVPLQSQIASDITAFFQAAVTNLQPPFCRLLHRLHPAVTALLADVELQFPVAVARLMDIPVALLWTMSASFFLSLDQLQKLVRNGALKADLLDDCEEHISGISPAQLADLRTVLRENDLRFLQIEMECISEVSKADCLIVNSVEGLEAEAIGSLRAMLHFPIYPIAFPYFKPEANHLVSYSDYKFDYLNWLDSQAAMSVLYISLGSFLSVSCAQMNEIVSALETSGVRYLWVVRGEVSWLKEKCGDRGIVVPWCDQLKVLSHPSVGGFWTHCGWNSTMEAVFAGIPMLTFPLFFDQVPNSRQILEVWKNGWELKRSVLGSEEFIAQKEILEVIEKFMDVVKGKELRERVLELKGICDQAVAEGGSSNINLNALMKDVLCVQGIYA* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0561 458 PANTHER UDP-GLYCOSYLTRANSFERASE 87A1-LIKE 10 450 - -
Vra5g0561 458 PANTHER GLYCOSYLTRANSFERASE 10 450 - -
Vra5g0561 458 Gene3D Glycogen Phosphorylase B; 18 443 - -
Vra5g0561 458 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 450 - -
Vra5g0561 458 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 257 396 IPR002213 GO:0008194
Vra5g0561 458 CDD GT1_Gtf-like 14 442 IPR002213 GO:0008194
Vra5g0561 458 Gene3D Glycogen Phosphorylase B; 249 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0561 Vra-Chr5 7329242 7331371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0561 9 450 Glycosyltransferase AT2G30150 42.984 1.60e-117 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0561 - - vun:114196047 823.928