Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0544 ATGGACGCAGATTCTGAAAATCGTGAAAATAGTGATTCTACCTTTGTTTGGGATCACAAATCACAGCTTTACTTCCACGCTAGTAGTGGATTTTACCATGACCCTAATGCCGGGTGGTATTATAGCAGCAGAGATGGTGCTTATTACAAATTTGAGGATGGGAATTATGTACTTTTAGATTCCAATAAGGACGATAATGCAGACACATATCTGGGCAAGGAAACTACCACAGAAAGTCCTCAACAAATCTCTGAGGGGAACGACATCGAGGATTATTTTTCCTTTCTTGAAAATAGATCTGAAACAAACCAACAGACAAGAATCCTGGCTAATGAAGCACTTGATGATGGCACAAATTCTGTGAGTAGTCCAACTTCTGAAAGGCCACCTCCACCACCATCCGAATGGTTAGAGGACACACTTATTGATCTGTACTTGTCTGGCTACAAGAATATAGCAGTAAGTGAAGTTGATGGCGTGACAGTGCCGCTGGAAACAGATGATGGATATAACACTTTAGCAGCTGATGCTTACAGCAAAACTTATGAAGTGGAAGGTGAGTGGAACCCAAACCAAGTAGGTGAAAATGGCTTAGCTGATACTAAAAGTATTGTAGATGAAGGTGTAGCTTACAACAACTCTTATGAACTGGAAGAGGGTGAGTGGATCCCGGACATGGAGGATGAATGTGACATAGCTGATAGAAGTACCATAGATGAAGGTGTGTTATCGGATGAAGAGAAATGGCGAGCTCAATATGGTCAAGTTACTGAATCAGGGAAAGATTTGGTTTTAGAGGTTCCAATTGTGGACTTGTGGGATTGGGAAATGGTTACGAGATTCAAAAGAGATGAAAAAGATAAAGTTGCAAGGTTGGTTGGAAGATTGGTCAGACCATCTGCAAAACAACATCCATCTATCCCTTCTGGTGGAGGGAAATTAAGATCTGCTCCCATCTGTGAAGCACATCTTGATCTGGTACGAGTTAGAACAGGACAAGTGTACAGATTGCGAAATCCTAGTGCAAAATACATGGCTTCATTATCAACTTATGATTCCTCAAATCCAACAAAACATTGGGATTTTCCCCAGCTATCACCTAATAGAAAAATCACTCAGCTCTCCAAATCCAGTGAAAGCTCTGCTTCAGTTTCAGATGATATCCCTGTAGAGAAGGATTTGTCTGCATTACCAAGTCAGCCCTCTGTATCTAAGCAAATTAAACATCAATACAGAGATAGGGCCGCTGAAAGAAGAATATTGCATGGTGGCTTCGGCATGGGTCCAGGACAGAAGAATCTGCCTGATGTTTATAATTCGCCATCTTCACCTGATGCTGGTTGTCCTCAAGAAGCTGCATCAGAGGCCTTGGAGATGTCATTTGGAGCAGGGGGAGGGGCTTGGAAGCTCTACGAAGGGCTTGGTGGAACCTATTCAACCAGTCGGAAATGTTGGCACTGCAGGTTTGGGATGGTCTCGTTGAAACGGATCACATGCTTAGTATCTGTTATAGGGTCTAAAGTGTAA 1527 0.425 MDADSENRENSDSTFVWDHKSQLYFHASSGFYHDPNAGWYYSSRDGAYYKFEDGNYVLLDSNKDDNADTYLGKETTTESPQQISEGNDIEDYFSFLENRSETNQQTRILANEALDDGTNSVSSPTSERPPPPPSEWLEDTLIDLYLSGYKNIAVSEVDGVTVPLETDDGYNTLAADAYSKTYEVEGEWNPNQVGENGLADTKSIVDEGVAYNNSYELEEGEWIPDMEDECDIADRSTIDEGVLSDEEKWRAQYGQVTESGKDLVLEVPIVDLWDWEMVTRFKRDEKDKVARLVGRLVRPSAKQHPSIPSGGGKLRSAPICEAHLDLVRVRTGQVYRLRNPSAKYMASLSTYDSSNPTKHWDFPQLSPNRKITQLSKSSESSASVSDDIPVEKDLSALPSQPSVSKQIKHQYRDRAAERRILHGGFGMGPGQKNLPDVYNSPSSPDAGCPQEAASEALEMSFGAGGGAWKLYEGLGGTYSTSRKCWHCRFGMVSLKRITCLVSVIGSKV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0544 508 MobiDBLite consensus disorder prediction 114 136 - -
Vra5g0544 508 CDD OCRE 13 54 - -
Vra5g0544 508 MobiDBLite consensus disorder prediction 372 410 - -
Vra5g0544 508 Pfam OCRE domain 12 53 IPR041591 -
Vra5g0544 508 MobiDBLite consensus disorder prediction 422 451 - -
Vra5g0544 508 PANTHER RNA-BINDING PROTEIN 6 475 - -
Vra5g0544 508 PANTHER D111/G-PATCH DOMAIN-CONTAINING PROTEIN 6 475 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0544 - - vun:114164765 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0544 5 6964856 6969752 Vra5g0544 5 6964856 6969752 ECH