Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0542 ATGGCGTCAATTTGCGACACCGATATCCCGCTTCAACTGAAGAACATCGACGCTTTCTTCGCTTCTTACAGAAACTCTCTTCAATCCATCACAGCCACCGCAATCAAAACCGCGCGATCTCAATCTCAACTGACAGATGTTAAAGCTAAACTGAGGGAGGCTGAGGATGAATTGGTAAAGGCGCTGGCAGTTAAGACTCGGAGAGAGGCGAAGAGAATGGCTCTAAAGGATTCTATTGCTTCTGTGAAGGAACGAGTTGAAGTTATGAAGACAAAGATTCAGAGGCAGAGAAGCAAGTGCGAAGAATGTGCTTCTGTTGTATCACAACACCGGCTTGTTTTGGCGGCTTCTGAACAGAAATCAAGTGAAAGCAATGAACTTAAAGATGAAGCCCAGGAGGCCATATCTTGGTACAATAGGATCCTTGGTTTTCATGTTGAAGGAGGACATGGGGTTAAATTCACTTTCAAGAATATTGATGAAAACAACCCAAATGAAGAGTTCTGTTTTACCATCCGTCATGAAGATGACATGTATACATTGCTAAATTGTGAACCATCTCTCAAAGATATCGACAAGTTGATCCATGAATTAAACAAGACAAATGGGCTATTTAAATTTGTGAGAACAATGAGGAGAAAGTTTCAAGAAGCAGTGACACAAGGCAGTCTATCTATGACAACAAATGAACACCAAGAGTCCACCTTTATCTCTGCATCTGCTCCAGTTTTGTCAACATTAACCATTATAGAAGGATATGAACATCAAGGTGAACCCACCAAAGGTAATGCACATCTCCAGAAACAAGTCAATCAAAGAATGGTAAAATCAGCAATTTTATCCCCTGGATCTGCATCATCTGTTTGTCAATCTCCTCGTTTGAAGGCCAGGAAATGA 897 0.4125 MASICDTDIPLQLKNIDAFFASYRNSLQSITATAIKTARSQSQLTDVKAKLREAEDELVKALAVKTRREAKRMALKDSIASVKERVEVMKTKIQRQRSKCEECASVVSQHRLVLAASEQKSSESNELKDEAQEAISWYNRILGFHVEGGHGVKFTFKNIDENNPNEEFCFTIRHEDDMYTLLNCEPSLKDIDKLIHELNKTNGLFKFVRTMRRKFQEAVTQGSLSMTTNEHQESTFISASAPVLSTLTIIEGYEHQGEPTKGNAHLQKQVNQRMVKSAILSPGSASSVCQSPRLKARK* 299
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0542 298 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 5 261 IPR045143 GO:0007059|GO:0031262
Vra5g0542 298 Coils Coil 79 99 - -
Vra5g0542 298 Gene3D Chromosome segregation protein Spc25 123 223 - -
Vra5g0542 298 Pfam Chromosome segregation protein Spc25 148 216 IPR013255 GO:0007059|GO:0031262
Vra5g0542 298 Coils Coil 114 134 - -
Vra5g0542 298 Coils Coil 37 64 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0542 K11550 - gmx:100804876 458.759
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0542 5 6915583 6918857 Vra5g0542 5 6915583 6918857 ECH