Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0536 ATGGGCAAGAAAAGACATTCAGAACATAGCAATGATCCATTTTTTGTTGCAGCTCACAACAGAACAAGACAACAACCTCAATGCACACAACCAGACAATGATGGTGTCCCAGAAGAGACATGTGCACAACAAAACCATTCTCCAAAATTGGCTTCTTTCACTTCCCAAAATGCTCAACTTTTCATAACTATACCTTCTTTTGTTGCCTTGCTGCTCCTTGTTTCTTCAATTGTCCCAGCAATGTGCCAACCCCTGCAGGGTAACCACACTTTTAGGCCACACCATGAGCTCCTCTACTTGAGGAGAGTCAGAGCTCACTTGAACAAGATTAACAAGCCTCCTGTCAAGACAATTCAGAGTCCAGATGGTGATTTGATAGATTGTGTGTTATCTCACCAGCAACCTGCTTTTGATCATCCAAAGCTTAGAAATCACACACCATTGGATCCACCAGAGAGGCCAAGGGGAAAAAACCAGACCAAAGTAGATAGGGAAAGTGAGAGCTTTCAGCTGTGGAGTGATTCTGGTGAAACATGCCCAGAAGGAACTGTACCAATCAGAAGAACAACAGAGGAGGATATTCTCAGAGCAAGTTCTATCCGAAGATTTGGAAGAAAACCAAGAGCTGTACGGAGAGACTCATCTGGCAGTGGTCATGAGCATGCTGTTGTTTTTGTAAATGGGGATCAATACTATGGAGCAAGGGCAAGCATAAACGTGTGGGCACCAAGTGTGAGTGATGAATTTGAATTCAGCTTATCACAAATGTGGGTTATTGCTGGGTCCTTTGGTAAAGATCTGAATACCATAGAAGCTGGTTGGCAGGTGAGTCCACAGCTGTATGGAGACAACTATCCAAGGTTCTTCACTTATTGGACAACTGATGCATATCAAACAACTGGGTGCTACAATTTACTCTGTTCTGGCTTTATTCAGACCAACAATAGGGTAGCAATAGGAGCAGCAATCTCCCCAAGATCTGCTTACAACAGAAGACAGTTTGATATTAGCTTAATGATTTGGAAGGATCCAAAACATGGACATTGGTGGTTGGAGTTTGGATCAGGTGTACTAGTGGGATATTGGCCAGCAAAGATGTTCAGTCAGTTGAGGAGTCATGCAAGCATGGTGCAATTTGGAGGAGAAATAGTGAACAGTCGTTCGAGGGGTTTCCATACTGCCACACAAATGGGGAGTGGCCATTTTGCTGAAGAAGGGTTCAGAAAAGCAGCATATTTTAGAAACTTGGAAGTCGTTGATTGGGACAACAGCTTGCTTCCTCTTACAAACATTCATCATTTGGCTGATCATTCCAATTGCTATAACATAAGGCAAGGAAGCAGCAATGTTTGGGGAACTTACTTTTACTACGGTGGCCCTGGAAGAAATGTCAGATGCCCATGA 1404 0.4338 MGKKRHSEHSNDPFFVAAHNRTRQQPQCTQPDNDGVPEETCAQQNHSPKLASFTSQNAQLFITIPSFVALLLLVSSIVPAMCQPLQGNHTFRPHHELLYLRRVRAHLNKINKPPVKTIQSPDGDLIDCVLSHQQPAFDHPKLRNHTPLDPPERPRGKNQTKVDRESESFQLWSDSGETCPEGTVPIRRTTEEDILRASSIRRFGRKPRAVRRDSSGSGHEHAVVFVNGDQYYGARASINVWAPSVSDEFEFSLSQMWVIAGSFGKDLNTIEAGWQVSPQLYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNRVAIGAAISPRSAYNRRQFDISLMIWKDPKHGHWWLEFGSGVLVGYWPAKMFSQLRSHASMVQFGGEIVNSRSRGFHTATQMGSGHFAEEGFRKAAYFRNLEVVDWDNSLLPLTNIHHLADHSNCYNIRQGSSNVWGTYFYYGGPGRNVRCP* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0536 467 MobiDBLite consensus disorder prediction 1 41 - -
Vra5g0536 467 MobiDBLite consensus disorder prediction 17 41 - -
Vra5g0536 467 MobiDBLite consensus disorder prediction 138 170 - -
Vra5g0536 467 Gene3D - 243 357 - -
Vra5g0536 467 MobiDBLite consensus disorder prediction 136 183 - -
Vra5g0536 467 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 51 467 - -
Vra5g0536 467 Pfam Neprosin activation peptide 117 224 IPR025521 -
Vra5g0536 467 Pfam Neprosin 250 460 IPR004314 -
Vra5g0536 467 PANTHER CARBOXYL-TERMINAL PEPTIDASE 51 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0536 Vra-Chr5 6822356 6827177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0536 - - gmx:100777828 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0536 5 6822356 6827177 Vra5g0536 5 6822356 6827177 ECH