Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0532 ATGATCACACGTTCTTCCATGGGTTCCATTTGCATGTGCCATTTTATTCTACCACTAACCATTGCTGTTGTTGTAACTCTAGGAGACAACACAGCAGAATCCTACTGGCTTCTAAAGATTAAATCAGAACTGGTTGATCCATTAGGAGCCCTGAGAAACTGGTCTCCAACAACTCATTTTTGTAGCTGGAATGGAATAACATGTGATGTTGATGAGGCACATGTGGTAGGCCTTAATTTGTCTGGCTCAGGAATATCAGGTTCCATTCCAGGTGAGTTCAGTCACCTAATTTCTCTTCAAGCACTTGATTTGTCTTCAAATAACCTCACAGGCTCCATCCCTTCTGAACTTGGGCAGCTTCAAAATCTAAGAATACTGCTTCTGTACTCAAATTATCTCTCCAGCAATATTCCTGAAGAGATAGGTAATTTGAGTATGTTGCAAGTTCTTAGACTAGGAGATAACAGTTTGGCAGATGAAATCCCACCTAGCATTGGCAACTTGAGTGAGTTGACAGTATTAGGTGTAGCCAACTGCAACTTAAGTGGAAGCATACCTGTTGAGGTTGGTAACTTGAAGCATCTTGTGTCTCTTGATTTACAAATGAACAATCTTAGCGGATTCATACCTAAAGAGATTCAAGGCTGTCAAGAGCTCCAGAATTTTGCAGCATCAAACAACATGCTTGAAGGAGAAATACCCTCCTCAATGGGGTCTCTGAAATCATTGAGAATTTTGAACCTGGCTAATAACACTCTATCTGGATCAATTCCTACCTCTTTGAGTCTTCTCTCCAATTTGACATACCTCAATTTGCTTGGAAACAAGCTAAATGGTGAAATTCCTTCAGGGATTAACAGTTTGAGCCAGCTACAGAAGCTTGACTTATCCAGAAACAACCTTTCTGGATCACTGACCCTCCTTAATGTCAACTTACAGAATCTTGAAACTATGGTTCTGTCTGATAATGCTTTAACAGGTATTCCATATAACTTCTGCCTCAGAGGTTCTAAACTTCAGCAACTGTTCTTGGCTAGGAATAAGCTTTCTGGAGGATTTCCCTTGGGGATACTCAACTGCTCCTCAATCCAACAGGTTGACCTTTCTGACAACAGTTTTGAAGGTGAACTTCCATCCAACCTGGACAAACTACAGAATCTCACAGATCTTATGCTCAACAATAACAGCTTCATTGGATCTCTACCTCCAGCAATTGGAAATATCAGTAGCTTGAGAAGTCTTTTCTTGTTTGGAAACTCTTTCACAGGAAAAATCCCAGTTGAGATTGGAAGGCTAAAGAGGTTGAACACCATTTACCTCTATGATAACCAGATGTCTGGACCTATTCCAAGAGAGTTAACAAACTGCACAAGCTTAACTGGAATTGACTTCTTTGGAAACCATTTTTATGGGCCAATTCCAGAGACTATAGGTAAGCTAAAGGACCTAACTGTTCTCCATTTAAGGCAAAATGATCTGTCAGGTCCAATCCCACCAAGCATGGGGTACTGTAAAAGGCTTCAGTTATTGGCATTAGCAGATAACAAGTTGTCAGGTTCCATACCCCCCACATTCAGTTACCTTTCACAACTTAGTACCATTACCCTTTACAACAACAACTTTGAAGGACCACTACCTGATTCCCTCTCTCTTCTTAGAAACCTTAAAATCATAAATTTTTCCAATAACAAGTTCAGTGGTAGTATCTTTCCTCTGACTGCTTCAAATTCTCTCACTGTTTTGGACTTGACAAACAACAGCTTCTCAGGTTCCATCCCTTCTATTCTAGCCAACTCTGGAGATCTCACCCGTCTCAGACTTGCAAACAATTTTCTCACAGGAACCATTCCTTCTGAACTTGGCCACCTCACTAAGCTAAACTTCCTTGATTTATCATTCAACAACTTAACAGGACATGTGCCACCTCAACTATCCAACTGCAAGAAAATTGAACACCTTCTACTGAACAATAACAGATTGAGTGGCCAAATGTTGCCGTGGTTAGGAAGCTTGCAAGAACTTGGTGAGCTGGATCTCTCATTCAACAACTTCCATGGAAGAGTTCCTGCCGAGCTTGGAGGCTGCTCAAAGTTGCTTAAGCTTTCTCTCCATAACAACAATCTCTCTGGAGAAATCCCTCTAGAGATTGGAAACCTTACTTCACTCAATGTTTTCAACTTGCAAAGGAATAGTCTCTCTGGCCACATTCCATCAACAATTCAGCAATGCTCTAAGCTGTATGAGCTAAGGCTCTCAGAGAACTTCCTCTCAGGTATTATACCAGTTGGACTAGGAGCAGTCACTGAGTTGCAAGTCATATTGGACCTCAGTAGAAACCTCTTTTCTGGTGAGATTCCGTCATCTCTGGGAAATCTCATGAAGCTAGAAAGACTTGATCTTTCTTTTAACCATCTTCAAGGACAAGTTCCTCCTTCACTTGGTCAACTTACCAGCCTTCATGTGCTAAATCTCTCAAATAACCATCTTCATGGCCTCATTCCATCAACCTTTTCAGGGTTCCCACTAAGCTCTTTTCTGAATAATGACCACTTGTGTGGCCCTCCACTAGCATTATGCTCAGAAGCTACGCGAATGAAGCTGTCAAACTCGCAAGTAGCAGCAATCATAGTAGCCATTGTCCTTACTTCAACTCTGATATGCTTAGTATTATTGTATATAATGTTGAGAATCTGGTGCAACTGGAAAAAAGTAGCTGTTTCAAGTGAAGATAGTGGCATGGTTGAGCAGAAGACAAGAAATGGAGAGTACTGGAACATGAATTCCCCTGAGCTGTTTTCTTCACCAGATATACAAATTTCAGCTACACCTTGCATTTGTAATCTCAAAATTGATGCAGCAGCCAGGGAAAATACCTTGGTTAGATAA 2886 0.4099 MITRSSMGSICMCHFILPLTIAVVVTLGDNTAESYWLLKIKSELVDPLGALRNWSPTTHFCSWNGITCDVDEAHVVGLNLSGSGISGSIPGEFSHLISLQALDLSSNNLTGSIPSELGQLQNLRILLLYSNYLSSNIPEEIGNLSMLQVLRLGDNSLADEIPPSIGNLSELTVLGVANCNLSGSIPVEVGNLKHLVSLDLQMNNLSGFIPKEIQGCQELQNFAASNNMLEGEIPSSMGSLKSLRILNLANNTLSGSIPTSLSLLSNLTYLNLLGNKLNGEIPSGINSLSQLQKLDLSRNNLSGSLTLLNVNLQNLETMVLSDNALTGIPYNFCLRGSKLQQLFLARNKLSGGFPLGILNCSSIQQVDLSDNSFEGELPSNLDKLQNLTDLMLNNNSFIGSLPPAIGNISSLRSLFLFGNSFTGKIPVEIGRLKRLNTIYLYDNQMSGPIPRELTNCTSLTGIDFFGNHFYGPIPETIGKLKDLTVLHLRQNDLSGPIPPSMGYCKRLQLLALADNKLSGSIPPTFSYLSQLSTITLYNNNFEGPLPDSLSLLRNLKIINFSNNKFSGSIFPLTASNSLTVLDLTNNSFSGSIPSILANSGDLTRLRLANNFLTGTIPSELGHLTKLNFLDLSFNNLTGHVPPQLSNCKKIEHLLLNNNRLSGQMLPWLGSLQELGELDLSFNNFHGRVPAELGGCSKLLKLSLHNNNLSGEIPLEIGNLTSLNVFNLQRNSLSGHIPSTIQQCSKLYELRLSENFLSGIIPVGLGAVTELQVILDLSRNLFSGEIPSSLGNLMKLERLDLSFNHLQGQVPPSLGQLTSLHVLNLSNNHLHGLIPSTFSGFPLSSFLNNDHLCGPPLALCSEATRMKLSNSQVAAIIVAIVLTSTLICLVLLYIMLRIWCNWKKVAVSSEDSGMVEQKTRNGEYWNMNSPELFSSPDIQISATPCICNLKIDAAARENTLVR* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0532 961 ProSiteProfiles Leucine-rich repeat profile. 242 264 IPR001611 GO:0005515
Vra5g0532 961 PRINTS Leucine-rich repeat signature 99 112 - -
Vra5g0532 961 PRINTS Leucine-rich repeat signature 288 301 - -
Vra5g0532 961 Pfam Leucine Rich Repeat 794 814 IPR001611 GO:0005515
Vra5g0532 961 Pfam Leucine Rich Repeat 818 840 IPR001611 GO:0005515
Vra5g0532 961 Gene3D Ribonuclease Inhibitor 526 867 IPR032675 -
Vra5g0532 961 SUPERFAMILY L domain-like 669 847 - -
Vra5g0532 961 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Vra5g0532 961 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 651 953 - -
Vra5g0532 961 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 447 666 - -
Vra5g0532 961 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 450 - -
Vra5g0532 961 Gene3D Ribonuclease Inhibitor 185 286 IPR032675 -
Vra5g0532 961 ProSiteProfiles Leucine-rich repeat profile. 818 839 IPR001611 GO:0005515
Vra5g0532 961 SUPERFAMILY L domain-like 276 376 - -
Vra5g0532 961 Gene3D Ribonuclease Inhibitor 306 525 IPR032675 -
Vra5g0532 961 SUPERFAMILY L domain-like 34 303 - -
Vra5g0532 961 SMART LRR_typ_2 671 695 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 264 287 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 288 311 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 384 408 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 792 815 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 312 335 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 96 120 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 623 647 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 816 839 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 480 504 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 240 263 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 192 215 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 719 743 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 552 577 IPR003591 -
Vra5g0532 961 SMART LRR_typ_2 144 168 IPR003591 -
Vra5g0532 961 PANTHER - 11 450 - -
Vra5g0532 961 PANTHER - 447 666 - -
Vra5g0532 961 PANTHER - 651 953 - -
Vra5g0532 961 SUPERFAMILY RNI-like 377 709 - -
Vra5g0532 961 Pfam Leucine rich repeat N-terminal domain 36 69 IPR013210 -
Vra5g0532 961 ProSiteProfiles Leucine-rich repeat profile. 98 120 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0532 154 883 Receptor kinase-like Gene Family AT5G46330 33.903 1.10e-108 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0532 - - gmx:100802757 1591.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0532 5 6734168 6737424 Vra5g0532 5 6734168 6737424 ECH