Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0530 ATGGGCCCTACAGAAATTGTGGATTTATCCAGTGATGATGAAAGTGAAACAGTTTGTTTGAAAGCTGTTAAGTTGGAGGGAGATTTTGTTACGGATAAGAGATATCAAAGTCATACTACTCGACAAGATTCTGAAGAAAATCTAAGTTCTACTGGTCCAAGTACAGGTCATAGTAACTCCAGTGTATTGGAGCAGGGACCATCACCAGTTGATGACACAGGCATTTCTTATGTGTCACCCATTGGTGCAGCACCCTTGTGCAGGCAGTTTTGGAAAGCTGGAAACTATGATGATAGGATTGGTTCTAAAGTTACAGTCCAAAATGCTAAAAGTTATCTACACGTGCACCCCATGTTCCTTCACTCAAATGCAACTTCCCATAAGTGGGCATTTGGTGCCGTAGCGGAGCTTCTTGATAATGCAGTTGATGAGATCCAAAGTGGGGCTACCTTTGTCATTGTAGATAAAACTTCAAACCCAAGGGATGGGAGTCCAGCATTGTTGATTCAAGATGATGGTGGTGGAATGGATCCAGAGGCGATGCGTCGTTGCATGAGTTTTGGATTTTCAGATAAGAAGTCACAGTTTGCTATTGGACGGTATGGAAATGGCTTCAAGACCAGTACTATGAGGCTTGGTGCAGATGCCATAGTCTTCAGTTGCCATCTAAATAATAGGATTTTGACTCAAAGCATTGGACTTCTGTCATATACGTATTTGACACAGACACAGCTTGACAGAATTGTAGTGCCCATGGTGAATTATGAATTTGATACATCCACTGGATCATTGAAAGTATTAAATGGAAATGAGCATTTTATGTCTAATTTATCCTTGCTGTTGCGCTGGTCACCATATTCATTAGAGGCAGATCTGCTGAAACAATTTGATGATATTGGACCTCATGGTACTAAAATTATTATCTACAATTTGTGGTGCAATGATGATGGGAGTTTGGAGCTAGACTTTGATACAGATTCTAAGGATATTCGTATTGCAGGGGATATCAAGCGTATTGATACACTTAAAGCCTGGAAGAGTATAAATGAGAATCACATAGCTAATCGGTTTCGTTACTCATTACATGTATATTTGTCCATATTGTACTTGAAGATCCCAGAACCTTTTCAAATTATATTGCGAGGGCAAGTTGTGAAGCTGCACAACATTGCTGATGATCTTAAATATCCTCAATTTGTTAAATATGCACCAGCTATTGGTGGATCTGCAACGGGAACAGCTTTGACAGTCACAACAATCGGATTTCTTAAGGAAGCTCCTCAAGTCAATATCCATGGTTTTAATGTATATCACAAAAATCGGCTTATACTGCCATTTTGGCAGGTTGTAAGCTATTCAGACAGTAGAGGTAGAGGAGTTGTTGGTATCCTGCAGGCAGATTTTATTGAGCCAACACATAACAAACAAGATTTTGAAAGAACTTCCCTGTTTCAAAAGCTTGAGGTGCGATTGAAGCAGATGACATGGGAATACTGGGATACACATTGTACATTGTTTGGATACAAAGTAAAGAGGAAGATTAAACCTGGGATTATATCAATGCAAAAACCAGTGGTTGTAGAAAAACCAGTTGTATCGAACAAACGTTCCTCCTCTCTTTTCAATGCAGAAGCATACGGGAATTCCTTTCAGTGTTCCAAAAATCTGCAAAGATTGGAACAAGGTTCTCAGAATAAGAGGAAGAACACACGTGAACTGGTAAACCTTCTGGATGCACAAAAGCTTGCGAGGACAAATATTGTAACCAGTGTTGGGTTTAATCAGAATAAACAGACCACTGCAACTCCAGCTGGCACGGTGGAAGACCAGAAGAATTTACATTTAATTCAACAAAATGAGCGACTGCGTGCGAAATGTCTAGAATTTGAAAAGACGGGAGAAGAACTTAATCTCAAGGTGGCGAATCTTAAAAGTAAAATAGAAGAAGCCAAAGATGAGTATAAACGGCTTTTGGCAGAAGCAAAGGCCCTGGACGTGAAAGAAGAGTAG 2010 0.399 MGPTEIVDLSSDDESETVCLKAVKLEGDFVTDKRYQSHTTRQDSEENLSSTGPSTGHSNSSVLEQGPSPVDDTGISYVSPIGAAPLCRQFWKAGNYDDRIGSKVTVQNAKSYLHVHPMFLHSNATSHKWAFGAVAELLDNAVDEIQSGATFVIVDKTSNPRDGSPALLIQDDGGGMDPEAMRRCMSFGFSDKKSQFAIGRYGNGFKTSTMRLGADAIVFSCHLNNRILTQSIGLLSYTYLTQTQLDRIVVPMVNYEFDTSTGSLKVLNGNEHFMSNLSLLLRWSPYSLEADLLKQFDDIGPHGTKIIIYNLWCNDDGSLELDFDTDSKDIRIAGDIKRIDTLKAWKSINENHIANRFRYSLHVYLSILYLKIPEPFQIILRGQVVKLHNIADDLKYPQFVKYAPAIGGSATGTALTVTTIGFLKEAPQVNIHGFNVYHKNRLILPFWQVVSYSDSRGRGVVGILQADFIEPTHNKQDFERTSLFQKLEVRLKQMTWEYWDTHCTLFGYKVKRKIKPGIISMQKPVVVEKPVVSNKRSSSLFNAEAYGNSFQCSKNLQRLEQGSQNKRKNTRELVNLLDAQKLARTNIVTSVGFNQNKQTTATPAGTVEDQKNLHLIQQNERLRAKCLEFEKTGEELNLKVANLKSKIEEAKDEYKRLLAEAKALDVKEE* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0530 669 Pfam Morc6 ribosomal protein S5 domain 2-like 359 499 IPR041006 -
Vra5g0530 669 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 130 333 IPR036890 -
Vra5g0530 669 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 4 665 IPR045261 GO:0016887
Vra5g0530 669 Gene3D - 107 309 IPR036890 -
Vra5g0530 669 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 132 226 - -
Vra5g0530 669 MobiDBLite consensus disorder prediction 31 74 - -
Vra5g0530 669 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 4 665 - -
Vra5g0530 669 Coils Coil 633 667 - -
Vra5g0530 669 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0530 Vra-Chr5 6695166 6709654 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0530 - - gmx:100795667 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0530 5 6695166 6709654 Vra5g0530 5 6695166 6709654 ECH