Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0526 ATGGGGTCTTTGTGGAGTTCACCGATAAGGAAAGAACAGATGGAAGCAGCGTTGAATAAGGCTAAGGGGATAGTATCCTCTTCCCCTGTTGTTGTCTTCAGCAAGACTTACTGTGGTTACTGCAAACGGGTCAAAGATCTCTTCCAACAGCTTGGAGCATCCTACAAGGTTGTTGAATTGGACACAGAAAGAGATGGAGATGATATTCATTCAGCTTTAATCGAGTGGACAGGACTTAGGACTGTGCCTAACGTGTTTATTGGAGGAAAGCACATTGGTGGTTGTGATAATGTTTTGGAGAAACACAAAACAGAACAACTGGTTCCTCTTCTGAATGATGCTGGGGCGATTGCCAATAACTCTGCTCAACTGTGA 375 0.44 MGSLWSSPIRKEQMEAALNKAKGIVSSSPVVVFSKTYCGYCKRVKDLFQQLGASYKVVELDTERDGDDIHSALIEWTGLRTVPNVFIGGKHIGGCDNVLEKHKTEQLVPLLNDAGAIANNSAQL* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0526 124 ProSiteProfiles Glutaredoxin domain profile. 18 118 - -
Vra5g0526 124 CDD GRX_GRXh_1_2_like 35 110 - -
Vra5g0526 124 TIGRFAM GRX_euk: glutaredoxin 30 110 IPR011899 -
Vra5g0526 124 SUPERFAMILY Thioredoxin-like 19 117 IPR036249 -
Vra5g0526 124 Gene3D Glutaredoxin 9 124 - -
Vra5g0526 124 PRINTS Glutaredoxin signature 30 48 IPR014025 -
Vra5g0526 124 PRINTS Glutaredoxin signature 75 88 IPR014025 -
Vra5g0526 124 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Vra5g0526 124 Pfam Glutaredoxin 30 92 IPR002109 -
Vra5g0526 124 PANTHER GLUTAREDOXIN 2 8 122 - -
Vra5g0526 124 ProSitePatterns Thioredoxin family active site. 30 48 IPR017937 -
Vra5g0526 124 PANTHER GLUTAREDOXIN-C2 8 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0526 Vra-Chr5 6595708 6597577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0526 24 117 Miscellaneous Gene Families AT4G15700 40.426 1.74e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0526 K03676 - qsu:111991481 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0526 5 6595708 6597577 Vra5g0526 5 6595708 6597577 ECH