Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0524 ATGACACAAGCACAATCTCTCTTCTCTCCCTTCACTCTTCCATTTCCTTCACCCTCCCAACGACACCGTTTCTTTTCTCACCCAATTTCACCCCTAATTCAAACCACCTCGATTGCCTTCTCAAACGCCACCGTTTCGGCTAATGCAGCTACATCCGTTCAACCTCTCCCCCAGCTGATTGAAACGCTGATTTCCGGGGTGAATTTGTCGGAAGATGAAGCCGAAGGGTGTTTGGACTCGCTGCTTCACGACCCAAACGAGGCCTTAATCAGCGCGGTGCTTGTGCTTCTCAGAGCCAAAGGAGAGACTTATGAAGAAGTTGTGGGGTTGGCAAGGGCAATGTTGAGACATGCGACGAAGGTTGAGGGCTTGAACGATGTTGTGGACATTGTGGGAACCGGAGGGGACGGTGCCAACACCGTCAACATTTCAACGGGGGCTTCCGTTCTCGCGGCGGCTTGCGGTGCCAGAGTTGCGAAGCAAGGGAACCGGTCAAGTTCTTCTGCGTGTGGAAGTGCAGACGTGTTAGAAGCTCTGGGAGTGGTGATTGATTTAGGTCCTGAGGGAGTAAAGAAGTGTGTGAATGAAGCTGGGATTGGGTTTATGATGTCTCCAAAATATCACCCGTCGATGAAGATTGTCAGGCCAATAAGAAAGAAGTTAAAGATCAAAACTGTATTCAACATATTGGGTCCAATGCTGAATCCAGCACACGCACCTTTTGCAGTTGTTGGAGTATACACAGAGGACTTGGTCTCCAAAATGGCTAAAGCACTCAACAGATTTGGCATGAAAAGGGCTTTAGTTGTTCACTCGGAAGGTTTGGATGAGATGAGTCCTCTTGGACCTGGTTTAGTGCTTGATGTTACTGCTGACAGGGTTGATAAGTTCTCATTTGATCCCTTGGACTTTGACATTCCTCGTTGTACTATTGAGGACTTAAAAGGTGGTGATCCCGAGTACAATGCAGAGGTTCTGAAGCGTGTTCTAGGTGGAGAGAGAGGGCCTATTGCAGATGCTTTAATTCTAAATGCAGCAGCGGCTCTATTGGTTTGTGGCCGTGTAAGGAACCTAGCTGAAGGGGTGGCTATGGCGCGTGAAACACAACAATCAGGGAAGGCTCTGAAAACTCTCAACTTGTTGAAGGATGTCTCAAATAAATTTAAAGATGATGTGGGCATGGATGCCTGA 1191 0.4811 MTQAQSLFSPFTLPFPSPSQRHRFFSHPISPLIQTTSIAFSNATVSANAATSVQPLPQLIETLISGVNLSEDEAEGCLDSLLHDPNEALISAVLVLLRAKGETYEEVVGLARAMLRHATKVEGLNDVVDIVGTGGDGANTVNISTGASVLAAACGARVAKQGNRSSSSACGSADVLEALGVVIDLGPEGVKKCVNEAGIGFMMSPKYHPSMKIVRPIRKKLKIKTVFNILGPMLNPAHAPFAVVGVYTEDLVSKMAKALNRFGMKRALVVHSEGLDEMSPLGPGLVLDVTADRVDKFSFDPLDFDIPRCTIEDLKGGDPEYNAEVLKRVLGGERGPIADALILNAAAALLVCGRVRNLAEGVAMARETQQSGKALKTLNLLKDVSNKFKDDVGMDA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0524 396 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 58 121 - -
Vra5g0524 396 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 122 393 IPR035902 -
Vra5g0524 396 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC-LIKE ISOFORM X1 42 394 - -
Vra5g0524 396 Pfam Glycosyl transferase family, helical bundle domain 58 118 IPR017459 -
Vra5g0524 396 TIGRFAM trpD: anthranilate phosphoribosyltransferase 60 380 IPR005940 GO:0000162|GO:0004048
Vra5g0524 396 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 42 394 IPR005940 GO:0000162|GO:0004048
Vra5g0524 396 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 56 121 IPR036320 -
Vra5g0524 396 Pfam Glycosyl transferase family, a/b domain 125 375 IPR000312 GO:0016757
Vra5g0524 396 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 125 389 IPR035902 -
Vra5g0524 396 Hamap Anthranilate phosphoribosyltransferase [trpD]. 58 384 IPR005940 GO:0000162|GO:0004048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0524 K00766 - gmx:100794615 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0524 5 6573176 6577360 Vra5g0524 5 6573176 6577360 ECH