Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0521 ATGATGAATTCGTTGTTGAATGCCAAGGCATGCGTGGGTGTGCGGTCACCGGTTATAGCGAACTCCGAGGAAAGGAGTGCGAAGAGGATGATGCAAAACGTGAATTGTAGGAACAGTAGGAATTGGAGGAATGTGGCTGTGTCGTGCGGTTCGGAGAAGAACGGGAACGATGGAATTGGCGCGAGTGAAGGGTTGAATTCGGGGTCGTTTTTGTCTCCGAGTCACAATTACGCGATCTTGAAGCACCGGATGGAGATAGCGGCAAAGTCTGAGTATTATGAAGAGGCTGCAAGGCTTCGTGACTCGCTCAAATGCTTCGAGGACGAAGTTCCTGTTCTGCGTCTGCGGAGGCTGTTGAAAGAAGCTGTTGCTGATGAGAGATTTCAGGATGCAGCTATATATCGTGATCAGCTCAAAGAAATTGCTCCACATTCTCTCTTAAAATGTTCAAGTGATTCTACAACCTTGGGAATTCGGGTACAAGTTAAGAGTGTATATTTAGAGGGCAGAAGTCAACCAACAGAAGAGGTATATTTCTTTGAATATAAAATAAGAATTACCAATAACACAAATCGCCCTGTTCAACTTCTGAGAAGGCACTGGATTATAACTGATGCTAATGGAAAAACTGAAAATTTCTGGGGAATTGGGGTTGGTGGTGAACAGCCAGCTATATTTCCTAGAAGTAGTTTTGAATTCTCTTCTACATGCCCTTTAAACGCACAAAATGGTAGAATGGAGGGTGACTTTGAGCTGATACATGTTGATCGAGTAGGTCCAAGAGCATTTAACGTGGCTGTTGCCCCATTTTCTCTCTCTCTACTTGGAGATGATGATGAGGATGTCGAAACTATCTGA 858 0.4417 MMNSLLNAKACVGVRSPVIANSEERSAKRMMQNVNCRNSRNWRNVAVSCGSEKNGNDGIGASEGLNSGSFLSPSHNYAILKHRMEIAAKSEYYEEAARLRDSLKCFEDEVPVLRLRRLLKEAVADERFQDAAIYRDQLKEIAPHSLLKCSSDSTTLGIRVQVKSVYLEGRSQPTEEVYFFEYKIRITNNTNRPVQLLRRHWIITDANGKTENFWGIGVGGEQPAIFPRSSFEFSSTCPLNAQNGRMEGDFELIHVDRVGPRAFNVAVAPFSLSLLGDDDEDVETI* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0521 285 Coils Coil 89 109 - -
Vra5g0521 285 PANTHER OS05G0170800 PROTEIN 25 280 - -
Vra5g0521 285 SUPERFAMILY ApaG-like 154 273 IPR036767 -
Vra5g0521 285 Pfam UvrB/uvrC motif 114 141 IPR001943 GO:0005515
Vra5g0521 285 Gene3D ApaG domain 148 279 IPR036767 -
Vra5g0521 285 ProSiteProfiles ApaG domain profile. 152 279 IPR007474 -
Vra5g0521 285 Pfam ApaG domain 170 252 IPR007474 -
Vra5g0521 285 ProSiteProfiles UVR domain profile. 109 144 IPR001943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0521 - K06195 gmx:100799029 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0521 5 6517497 6520941 Vra5g0521 5 6517497 6520941 ECH