Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0509 ATGGCTGCTTCTTTAGAAAAGGAACAGCAACGAAACCAAGTTATTGGAATTATCGAAGAAGAGAAATTGCAGAAGCAGGAGAGTAAGGGCAGCAATAAAATCACACGCACGCAATTGGAGAGCGGCGAAGGGGAAAGAGAGATGACTCCTACGGCTGCCAATTCCATGCACAGGTCTGGTTCGAGGCCTCAACTTGATGTGAGCAAAGCTGAGATTCAAGGGAATGAGGAGGAGAAGTATCCAACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCACCTAGCACTTGACATTGGAGGATCTCTAATAAAGTTGGTGTACTTTTCAAGACATGAAAACCAATCAGTGGATGATAAAAGGAAGAGAAGTGTAAAAGAGCGACTGGGGTTTTCTAAGGGTAACAGGAGAAGCTACCCTATCCTTGGTGGAAGGCTACACTTTGTGAAGTTTGAAACGAGAAAGATTAATGAGTGCTTGGATTTCATTCATTCAAAGCAGCTTCACTGTGGTGGGTTGGAGCCATGTTACTCTGATGGTGTGACTGACCAGAATGGTATAATTAAGGCTACTGGTGGTGGAGCATACAAGTACGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGACTGCCTTGTGGCTGGAGCTAACTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCAAAAAGAGTTTGTTCAAATTGAACCCAATGATTTATTCCCTTATCTTCTGGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGAGATGGGAAATTTGAGAGGATTAGTGGGACAAATGTTGGGGGTGGTACTTATTGGGGCTTGGGAAGACTTTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAGAAAGGAGATAATAGAAGTATGGACATGCTAGTTGGGGATATATATGGGGGTTTGGACTATTCTAAGATTGGCCTATCAGCTTCCACTATTGCCTCAAGTTTTGGCAAAACAATATCAGAAAAAAAGGAGCTTGAAGAATACAGACCTGAAGATATATCACTTTCTCTTCTAAGGATGATTTCATACAATATTGGTCAGATAGCTTACTTGAATGCATTGCGATTTCGGTTGAAGAGAATCTTTTTTGGTGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTACATTTCTGGTCAAATGGAGAAGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTTGGAGCTTTAGGTGCATTTATGAGTTATGAGAAGCATGGTTTAGATGACCTCATGGTTCATCAGTTGGTGGAAAGGTTTCCAATGGGTGCTCCGTATACAGGAGGCAAGATTCATGGCCCACCACTTGGAAATTTGAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCGGAAGGGAACTGAGATTACTGCACCCGTGCCAATGACTCCACTTGCTGGAACTACTGGACTTGGGGGTTTTGAGGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCAAGTGCTCTAAGTGTCGGTGTTCTCCACCTAGTACCAACATTGGAGGTGTTTCCATTACTAGCAGACCCAAAATTGTATGAGCCAAATACAATTGACCTATCTGATAACAATGAACTAGAATATTGGCTCACCATTTTATCAGAGCATTTGTCAGATCTTGTGGACAAGGCAGTAGCAAGTGAAGGTGGAACTGATGATGCAAAGAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCAGCCCACTTGGCAAGGTTGATGGAGGAGCCTTCCGCATATGGGAAGTTAGGCCTCGCCAACCTCTTGGAAATGAGGGAAGAATGCTTGAGGGAATTCCATTTTGTTGATGCCTACAGAAGTATAAAGCAGAGGGAAAATGAGGCATCACTTGCTGTTTTACCTGACTTGCTGGTGGAACTTGATAGTATGGATGAGGAATCAAGACTGCTTACACTAATTGAAGGTGTTCTTGCGGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAACAAAATGCATAGACCTTGGCGGGTGGATGATTTTGATGACTTTAAAGAGAGAATGTTAGGGACCAAAAACAAGAAAAATACTCGGCACAAGAGAGCTTTACTTTTTGTAGACAACTCAGGTGCTGACATTGTTCTAGGGATGCTTCCTCTAGCTAGGGAACTCCTCCGCCGAGGAACTGAAGTAGTGTTGGTTGCAAACTCTCTTCCTGCTTTAAATGATGTAACTGCAATGGAGCTTCCTGACATCATAGCTGAGGCTGCCAAGCATTGTGACATTCTAAGGCGAGCTGCTGAAGTTGGAGGCTTGCTTGTGGATGCAATGATTAATACTTCAAACAGCTCTATAGAAAATTCATCTTCAGTCCCTTTGATGGTTGTCGAGAACGGGTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTAGCTGCTGCCGCAAAAGATGCTGATCTGTTAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTCAATGCTCGGTTTAAGTGTGATGCTTTAAAGCTTGCTATGGTGAAAAATCAGAGATTGGCTGAAAAATTGGTTAAAGGGGACATATACGACTGTATTTGCAAATACGAACCTGTTAGTTAA 2748 0.4239 MAASLEKEQQRNQVIGIIEEEKLQKQESKGSNKITRTQLESGEGEREMTPTAANSMHRSGSRPQLDVSKAEIQGNEEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHENQSVDDKRKRSVKERLGFSKGNRRSYPILGGRLHFVKFETRKINECLDFIHSKQLHCGGLEPCYSDGVTDQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIEPNDLFPYLLVNIGSGVSMIKVDGDGKFERISGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRSMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGNLNEKISWMEKFLRKGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALSVGVLHLVPTLEVFPLLADPKLYEPNTIDLSDNNELEYWLTILSEHLSDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFHFVDAYRSIKQRENEASLAVLPDLLVELDSMDEESRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMHRPWRVDDFDDFKERMLGTKNKKNTRHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIIAEAAKHCDILRRAAEVGGLLVDAMINTSNSSIENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLLILEGMGRALHTNLNARFKCDALKLAMVKNQRLAEKLVKGDIYDCICKYEPVS* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0509 915 MobiDBLite consensus disorder prediction 1 67 - -
Vra5g0509 915 Gene3D - 552 637 IPR035073 -
Vra5g0509 915 PANTHER PANTOTHENATE KINASE 36 837 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vra5g0509 915 Pfam Damage-control phosphatase ARMT1-like domain 622 900 IPR002791 -
Vra5g0509 915 PANTHER PANTOTHENATE KINASE 2 36 837 - -
Vra5g0509 915 SUPERFAMILY AF1104-like 531 913 IPR036075 -
Vra5g0509 915 Gene3D - 315 427 - -
Vra5g0509 915 SUPERFAMILY Actin-like ATPase domain 205 438 IPR043129 -
Vra5g0509 915 SUPERFAMILY Actin-like ATPase domain 93 233 IPR043129 -
Vra5g0509 915 MobiDBLite consensus disorder prediction 52 67 - -
Vra5g0509 915 TIGRFAM panK_eukar: pantothenate kinase 94 437 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vra5g0509 915 Pfam Fumble 94 436 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vra5g0509 915 Gene3D - 86 246 - -
Vra5g0509 915 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 716 913 - -
Vra5g0509 915 PIRSF PanK_long 48 915 IPR015844 GO:0004594|GO:0015937
Vra5g0509 915 MobiDBLite consensus disorder prediction 13 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0509 Vra-Chr5 6065049 6082147 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0509 K24265 - gmx:100781580 1640.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0509 5 6065049 6082147 Vra5g0509 5 6065049 6082147 ECH