Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0505 ATGGAACAAATTACACTCTCTCAATATGAAGATGAAGATTCCGTTTTTTCAGATTGCCAGAGCAGTGTTTCCGTCATCGGAATGCTTCCGCCAGAACACTCTTCTTTAGTTAGGCTTCCAGAAGGTGATGTGCTTCACGACCTTATCAAGAGACGCTTCATTTGTGGCCTGGGCATGCTCGGGCCCAAAACAGAGGTTCTTTCCGTTCACCGAAACTCTTGTTCGGGCGTCGTTTTGCAGGCGCGGCTCCAGTCCTTTCAGCTTCACGCTAAGGCCGTGGCAGAACTGCGTGAAGGGAATGCCAACGTCAAGTACGCTTGGTACGGAACTCGCGGCGAAGACGATGTAAACGACATCGTTTCTCATGGGTTTGCCCACGTCCACGGTCCTAAACTTCTTCTCTCCCACGATAACGCTCCTCTCCAAAGTGTTAGAGAGTGTGTGGTTGGGAAAGACGGTGTGAGGCACGCACTACTTTGCCGCGTTATTCTAGGGAGATTGGAAGTTGTTGACGATGGCACCGAACAATGTTATCCAAGTTCCGAAAAGTATGATTCTGGGGTGGATAGTTTTTCAGCTCCCAGCAAGTACATAATTTGGAGTAATCGCATGAACACTCATGTCTTGCCTGCATATGTTGTAAGCTTCAGGGTTCCTCCTTTCAAAGGCATTGAGAAGAGTGAAGAAGAATTTTTGAGACCTACTTCGCCTTGGATGCCATTCCCAACTCTGATTTCTGCGCTTTCAATGGTTTTGTCTGCTCGTGATATTGCTCTAATCTCTAAGTTCTACGAAGATAAAAGAGAGAAGAAGATTTCACGACATGAACTTATACAAAGAGTGAGACAAATAGCAGGTGACAAGTTGCTGTTTGCAGTCATCAAATCTTTCAGAGAAAAGAAGAAACAAAGGTTTCTGTACAAACAAGGTCAAAGAATGGCTTAG 945 0.4571 MEQITLSQYEDEDSVFSDCQSSVSVIGMLPPEHSSLVRLPEGDVLHDLIKRRFICGLGMLGPKTEVLSVHRNSCSGVVLQARLQSFQLHAKAVAELREGNANVKYAWYGTRGEDDVNDIVSHGFAHVHGPKLLLSHDNAPLQSVRECVVGKDGVRHALLCRVILGRLEVVDDGTEQCYPSSEKYDSGVDSFSAPSKYIIWSNRMNTHVLPAYVVSFRVPPFKGIEKSEEEFLRPTSPWMPFPTLISALSMVLSARDIALISKFYEDKREKKISRHELIQRVRQIAGDKLLFAVIKSFREKKKQRFLYKQGQRMA* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0505 314 Gene3D - 34 218 - -
Vra5g0505 314 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 8 306 IPR044964 -
Vra5g0505 314 Pfam RCD1-SRO-TAF4 (RST) plant domain 233 298 IPR022003 -
Vra5g0505 314 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 8 306 - -
Vra5g0505 314 ProSiteProfiles PARP catalytic domain profile. 21 236 IPR012317 GO:0003950
Vra5g0505 314 ProSiteProfiles RST domain profile. 232 303 IPR022003 -
Vra5g0505 314 SUPERFAMILY ADP-ribosylation 66 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0505 Vra-Chr5 5939069 5941552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0505 - - vra:106760244 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1634 7 34804299 34807675 Vra5g0505 5 5939069 5941552 PCT