Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0502 ATGGCAAAACAGACATCTGAAGTGGCCATTGAAGAGCTGAAGAAGCTTCTCAGAGAAAAAGAAGAGTTTAAAGTTGAAGAAGTGATAGCTGAGTTACAAAAACATCATGACCCTGCTTTGCAAAGAATCATACTCGGATTCACTTACTTCAAGATCAACAATTTCGATAAGAACCCGGATCTGTATAACAAACTTGCCAATGGCCAAAGCCCCCAGTATCTGGTGTTTGCTTGTTCTGACTCTCGAGTGAGTCCTACAACTATCCTCCATTTCCAACCTGGAGAAGCTTTCATGGTCCGCAACATTGCTAACATGGTCCCTCCATTTAATCAGCTAAGGCACAGTGGAGTTGGCGCAGCCATTGAGTATGCTATCACTGCTCTCAAGGTACCAAACATTCTGGTCATTGGCCACAGTCGCTGCGGTGGAATCCAAAGGCTTATGAGTCATCCAGAAGATGATTCTGCCCCCTTTGACTTCATAGATGATTGGGTGAAAATTGGTTTGCCAGCTAAACTGGCCGTTCTGAAAGAATATGAAGGCTATGATTTCAAGGACCAATGCAAATTCTGTGAAAAGGAGTCAGTGAATAACTCGTTAGTGAACCTGAGGACATATCCATATGTTGAAAGAGGGATAAGGAACAAGACCATAGGACTGTTGGGAGGTTACTATGATTTTGTGAAGGGAGAATTCAAGCTTTGGAAGCATGTGACTCATGTCACTGAACCCATTACTATCCCTCTCTCAACCCATCAGTGA 762 0.4331 MAKQTSEVAIEELKKLLREKEEFKVEEVIAELQKHHDPALQRIILGFTYFKINNFDKNPDLYNKLANGQSPQYLVFACSDSRVSPTTILHFQPGEAFMVRNIANMVPPFNQLRHSGVGAAIEYAITALKVPNILVIGHSRCGGIQRLMSHPEDDSAPFDFIDDWVKIGLPAKLAVLKEYEGYDFKDQCKFCEKESVNNSLVNLRTYPYVERGIRNKTIGLLGGYYDFVKGEFKLWKHVTHVTEPITIPLSTHQ* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0502 253 Gene3D Carbonic anhydrase 28 246 IPR036874 GO:0004089|GO:0008270
Vra5g0502 253 SUPERFAMILY beta-carbonic anhydrase, cab 32 245 IPR036874 GO:0004089|GO:0008270
Vra5g0502 253 SMART Pro_CA_2 66 236 IPR001765 GO:0004089|GO:0008270
Vra5g0502 253 PANTHER CARBONIC ANHYDRASE 1 247 IPR001765 GO:0004089|GO:0008270
Vra5g0502 253 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 78 85 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vra5g0502 253 Coils Coil 6 26 - -
Vra5g0502 253 CDD beta_CA_cladeB 46 235 IPR045066 GO:0004089|GO:0008270
Vra5g0502 253 PANTHER CARBONIC ANHYDRASE 1 247 - -
Vra5g0502 253 Pfam Carbonic anhydrase 73 231 IPR001765 GO:0004089|GO:0008270
Vra5g0502 253 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 122 142 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0502 Vra-Chr5 5876160 5880040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0502 K01673 - gmx:547671 410.609