Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0499 ATGAAAAAATCGCTCTCCAAAGGCTCCGAGTCGTCCACTCAGTTGGACTCGCCACTCCAATTCCACTCGCCGATGCGGTGGGACGGGACCGATCCGCCGGAGTCTCCGGAATACCGGTCGCCGGGAAACTTGACGGAAAGGCATGTGGACCACTCTATGGCAATCGTCACCGTCGGCAACCTCAAGCAGCTCGCTCCAGACAAGCGCGCGGAGCACCGGAAGCCGCCGGAAAATCCGCCGCCTCCTTTGAGGGTGTTCAACGGCACGGTGACGGAGGAGACGCATCGTCCGGCGGCGAAAGCGGCTCCTGCGATGGTCGGAGGCGAGAGGAGATCGAGGTCGTCGGGGTGGACTACGGAGGAGACGGTGTGCAAGGCGGCTCTAGGGTTCCGGCTGAGCGAGATGGTGGTGTGTCTGATTTCGTTTTCTGTTATGGCGGCGGATAAGACGCAAGGATGGAGCGGTGACTCCTTTGATCGCTATAGAGAATATAGGTACTGTTTATCTGTGAATATAATTGGATTTGCATACTCAGCGTTGCAAGCATGTGATCTGTCATGTCAACTTGCCACGGGGAAACACTTTATCAGTCACCACCTTCGCAACCACTTTGATTTCTTCATGGATCAGGTTCTGGCTTATCTTCTGATATCAGCATCATCATCTGCAGCCACACGGGTTGATGATTGGATATCGAATTGGGGGAAAGATGAGTTCACAGAAATGGCCACTGCTTCAATTGGAATGTCCTTCCTCGCTTTTCTTGCCTTTGCTATGAGTTCACTCATCTCTGGTTACACCCTATGCAACCGCAGCTCCATGTGA 825 0.5382 MKKSLSKGSESSTQLDSPLQFHSPMRWDGTDPPESPEYRSPGNLTERHVDHSMAIVTVGNLKQLAPDKRAEHRKPPENPPPPLRVFNGTVTEETHRPAAKAAPAMVGGERRSRSSGWTTEETVCKAALGFRLSEMVVCLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNIIGFAYSALQACDLSCQLATGKHFISHHLRNHFDFFMDQVLAYLLISASSSAATRVDDWISNWGKDEFTEMATASIGMSFLAFLAFAMSSLISGYTLCNRSSM* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0499 274 MobiDBLite consensus disorder prediction 1 46 - -
Vra5g0499 274 MobiDBLite consensus disorder prediction 94 114 - -
Vra5g0499 274 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 71 274 - -
Vra5g0499 274 PANTHER CASP-LIKE PROTEIN 71 274 - -
Vra5g0499 274 Pfam Casparian strip membrane protein domain 123 256 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0499 Vra-Chr5 5810736 5812717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0499 - - gmx:100789870 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0499 5 5810736 5812717 Vra7g1641 7 34892917 34894534 ECH
Vra5g0499 5 5810736 5812717 Vra5g0499 5 5810736 5812717 ECH
Vra7g1641 7 34892917 34894534 Vra5g0499 5 5810736 5812717 PCT