Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0498 ATGGTGGTGGCGGGTTTGTCTCCGGCCATCTCCATCTCCACCGCCACCACAACCCCCTCTTGCTTCCATTCTCGCGCCACAAAACCACCTTCTTTTTTCGGCCTTCTCCACTCTCCCCACCCCAATCTCTCCATCTCCGCCAGGAGGAACCGCTACAACACCACCCACTGTTGCCGCTGCTCCCTCAATTCCGGCGATACCTACGTCAATTGGGATTGGAATCGATGGTGCCGCTATTTCTCGGAAATCGAACAGGCCGAGAACTTTGCCTCTGTCCTTAAGTTTCAACTTGATGATGCTATAGAGAAGGAAGACTTTGAAGAGGCCATTAAGTTGAAGAGGGCTCTTTTGGAAGCAACGTCCAAGGACACTGTTGCTGAAATTATGGATCAGTTGAAGAGTGCTATAGATGATGAACGATATCATGATGCTTCAAGATTGTGTAAATGCACTGGAAGTGGACTGGTGGGCTGGTGGGTAGGTTACTCAAAAATCACTGATGATCCCTTTGGTAGAATTATACATATAAGTCCTGGCATGGGTAGGTTCATTGGCAAGAGTTACAGTCCAAGACAGTTGATGACAGCATCTAGTGGAACTCCAATTTTTGAAATTTATGTGGTAAAAAATGCTGATGATACGTATCATATGCAGGTAGTGTATTTGCGACAAGCCAAAGGAAAGTCAAAGAGAAACCCTCTATCTATATCTGCTAAAGGCCCATCCAAACCTGAGGTGGATAATGTATCTTCATCAGTTGAGGTGCAGGAAGATGAAGAGAAGGTTGAAAGAAATGATGAGAAAAACAATAACATCGAGGCAGTAACTGAAGAGGGAATTAAAAGTGTCATAAATTTTCTTAAAGAAAAAATTCCAGGATTAAAAGTCAAAGTTATGAATGTTAATGTTGAAGAGGAAGCAGCAGAGAACAATGATTCTATTCAGCAATTGATGGAGGATGATAGTAATAAAACTGGCACTGGTGAGAATCATGAAGATGAAGTTGATAATCTCGATGAACCTGATGGGGTCACTCTAGATAGAGATGGAGATGCCACGGTAGAAGAAAAGGATTTGGAAATGAAGCTTTTTATTGGTGGGGTTGTACACAACAATGAGGATACTCCTCTCAAGGATGATTTTGTACGTCTTCCAGCAGTAATAAAAAATATGGAAAAAGATTCTTTTGTCTTCAATTTTGCTAGCAAAAATCCAGACTATGGTATCAAAGAAGATAAAACTCCCAATATCAAAGTGGCCGCGTTAGCAGCTCAAGGAGTCTCGGAGCTTATGCCTCCTGATGTTGCTAATGCATTTTGGAGTTCCGACAAAGTGTCTTCCAAGATCTCCAAAAGCATGCGTGATATTGTCAGAGTTGCTATGAGTCAAGCACATAAAAGAACTAGATTATCTGGGGATACATATTTTAACCGGATTACCTGTTCAAGAGGGGATTCTGATCCTTTTGATGGACTTTATGTTGGCGCATTTGGCCCTTATGGCATGGAAGTAGTTCATTTGAGGCGAAAATTTGGACATTGGAATGAAGGGGACAGTGAAAATAACACTTCAGATGTCGGATTCTTTGAGTATGTAGAGGCTGTGAAGTTAACTGGGGATCTTAATGTTCCTGCTGGCCAGGTGACATTCCGTGCAAAAATTGGCAGAGGCAATCGCAACACCAATCGTGGGATGTATCCTGATGATTTAGGAGTGGTTGCTAGTTATAAAGGGCAGGGGAGAATAGCTGACTATGGTTTTCGAAATCCAAAATGGGTGGAAGGGGAACTGCTCCAACTTAATGGCAAGGGCATGGGACCTTACATGAAAGGTGCAGACCTCGGCTTCCTTTATGTAGTACCTGAACAAAGTTTTCTAGTGTTATTCCACCGGTTGAAACTACCCGAGTAA 1911 0.4275 MVVAGLSPAISISTATTTPSCFHSRATKPPSFFGLLHSPHPNLSISARRNRYNTTHCCRCSLNSGDTYVNWDWNRWCRYFSEIEQAENFASVLKFQLDDAIEKEDFEEAIKLKRALLEATSKDTVAEIMDQLKSAIDDERYHDASRLCKCTGSGLVGWWVGYSKITDDPFGRIIHISPGMGRFIGKSYSPRQLMTASSGTPIFEIYVVKNADDTYHMQVVYLRQAKGKSKRNPLSISAKGPSKPEVDNVSSSVEVQEDEEKVERNDEKNNNIEAVTEEGIKSVINFLKEKIPGLKVKVMNVNVEEEAAENNDSIQQLMEDDSNKTGTGENHEDEVDNLDEPDGVTLDRDGDATVEEKDLEMKLFIGGVVHNNEDTPLKDDFVRLPAVIKNMEKDSFVFNFASKNPDYGIKEDKTPNIKVAALAAQGVSELMPPDVANAFWSSDKVSSKISKSMRDIVRVAMSQAHKRTRLSGDTYFNRITCSRGDSDPFDGLYVGAFGPYGMEVVHLRRKFGHWNEGDSENNTSDVGFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNRNTNRGMYPDDLGVVASYKGQGRIADYGFRNPKWVEGELLQLNGKGMGPYMKGADLGFLYVVPEQSFLVLFHRLKLPE* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0498 636 PANTHER PROTEIN EXECUTER 2, CHLOROPLASTIC 53 636 - -
Vra5g0498 636 MobiDBLite consensus disorder prediction 307 349 - -
Vra5g0498 636 MobiDBLite consensus disorder prediction 307 323 - -
Vra5g0498 636 Pfam Cyclin D1 binding domain 477 634 - -
Vra5g0498 636 PANTHER PROTEIN EXECUTER 1, CHLOROPLASTIC 53 636 IPR044680 GO:0010343
Vra5g0498 636 Coils Coil 255 275 - -
Vra5g0498 636 MobiDBLite consensus disorder prediction 231 267 - -
Vra5g0498 636 Coils Coil 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0498 Vra-Chr5 5802327 5810404 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0498 - - gmx:100786321 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0498 5 5802327 5810404 Vra5g0498 5 5802327 5810404 ECH