Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0496 ATGAACATCCACTTCTTCTGCTGCTTCTTCTTGTCGCTCTCATCTTTCCATGTTTCTCTAGCCACCCGCCAACGCATAAACCCATTCAGCCCCAAAGCCTCCCTCATTCGCTATTGGAACACTCGAGTCACCAATACTGTTCCAATCCCTCACTTTCTTCTGGCTAAAGCTTCACCTCTTACCCCACAACACTATGCTATTCTCAACAAACTTTTAAACGAAAAACCCAAACCTTACATTCCCAAGCTTCACCAATCCCTCTGTTCCTCACCCAACTTGTTCTGTTCCTTCGACGATGCATCAGACACGCACACACTACAGCGCAAAAACGACGACTCCAACTTCGCCGTTTACAACAACAAACACTTCGCTAACTACGGCTCCTCTAAAGTCGACGGAGTCGACTCCTTCAAAAACTACTCCAACGGCCTAAACGCCAACAACGACGCGTTTCGGAAATACAGCGACTCCTCCACGCGCCGCGCCGAACAGTTCAAGAACTACGCCGATAACGGTAACGTTGCGAATACGAACTTCTCCAGCTACGGTTCCGCCGCTGCTCAATCCTCCAGCGATTTCAACAACTACGATAAAACGGTGAACGTTCCCAACCTCGGTTTCACCACCTACGACTCCGGCTCCTCCAACCACAAACTATCGTTCGCCAGCTACGGCAACGAAACAAATTCCGGATCGCAATCCTTCTCGAGCTACGGAAAACGCGTCATTGGCGGAACCAGCGAGTTCACGAATTACGCCAGCGACGCGAACATTCTGCAATCGCATTTCAACAATTACGGCGACTTCAGCGCCGGTGCAGTCAACGACTCCTTCAAGTCCTACAGCTTCAACGGTAACAATCCGCGGAACGATTTCAAAACATACGGGGCCGGGTCGAGAGGGTCCGCCGCCGAAAATTTCATCAGTTACCGGAACCGCGCCAATGTCGGCGACGACTCGTTCCAAAGCTACGCCGCGAGGTCGAAGTCCGGCACCGCCACATTCGCGAACTACGGAATGTCGTTCAATGTCGGAAACGACAGTTTCGCGGAGTACGGGAAGGGTGCGACGGGGAAGAGCTCGTTCGGGTTTAAATCTTACGGGTTGGGCCGCGCGTTTAAAGTGTACAACAAAGACGGGGCGTCATTTTCGGGGTATCGGAATATCAGCGCAACAAGTGGCAGAGTTGTAAATAAGCGCGTGGAGCCGGGTAAGTTCTTTAGAGAATCCATGATGAAGGAAGGGAACGTGATTTTAATGCCTGACATTAAGGATAAAATGCCTGCAAGGTCGTTTTTGCCCCTGGCGATTGCTTCGAAATTACCATTCTCATCGGCAAGGATAGACGAAATGAGGGAATTGTTCAACGCGCGGGAGGGGTCTTCTACAGAGCGCGTGATAGTTAACGCGTTGGGTGAGTGCGAGAGGGAGGCGAGCAGGGGAGAGACGAAACGGTGTGTCGCGTCTGCAGAGGAAATGATAGAGTTTGCGGCATCGGTGATGGGTCCCAGTAGTGTGGTGAGGACCACGGAGAATGTGAACGGTTCAGGATCGAGTGTGATGATTGGTAAGGTCTACCCGGTGGACGGTGGAAAAGTAACGAAATCAGTTTCGTGTCATCAGAGTTTGTACCCTTACTTGCTGTATTATTGCCACAGTGTACCCGAAGTGAGAGTTTATGAAGCTGATATTCTTAACGTGGAGACGAAGGAGAAGATGAATGACGGTGTTGCCATCTGTCATATTGACACGTCATCGTGGGGCCCGGAACACGGGGCATTCTTGGCATTGGGGTCAGGCCCTGGGAAAATTGAGGTTTGCCACTGGATTTTCGAGAACGACATGACGTGGACCACTTGA 1860 0.5108 MNIHFFCCFFLSLSSFHVSLATRQRINPFSPKASLIRYWNTRVTNTVPIPHFLLAKASPLTPQHYAILNKLLNEKPKPYIPKLHQSLCSSPNLFCSFDDASDTHTLQRKNDDSNFAVYNNKHFANYGSSKVDGVDSFKNYSNGLNANNDAFRKYSDSSTRRAEQFKNYADNGNVANTNFSSYGSAAAQSSSDFNNYDKTVNVPNLGFTTYDSGSSNHKLSFASYGNETNSGSQSFSSYGKRVIGGTSEFTNYASDANILQSHFNNYGDFSAGAVNDSFKSYSFNGNNPRNDFKTYGAGSRGSAAENFISYRNRANVGDDSFQSYAARSKSGTATFANYGMSFNVGNDSFAEYGKGATGKSSFGFKSYGLGRAFKVYNKDGASFSGYRNISATSGRVVNKRVEPGKFFRESMMKEGNVILMPDIKDKMPARSFLPLAIASKLPFSSARIDEMRELFNAREGSSTERVIVNALGECEREASRGETKRCVASAEEMIEFAASVMGPSSVVRTTENVNGSGSSVMIGKVYPVDGGKVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILNVETKEKMNDGVAICHIDTSSWGPEHGAFLALGSGPGKIEVCHWIFENDMTWTT* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0496 619 Pfam BURP domain 406 618 IPR004873 -
Vra5g0496 619 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 5 619 - -
Vra5g0496 619 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 5 619 - -
Vra5g0496 619 SMART BURP_2 404 619 IPR004873 -
Vra5g0496 619 ProSiteProfiles BURP domain profile. 406 619 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0496 Vra-Chr5 5728535 5730916 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0496 - - gmx:100784264 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0496 5 5728535 5730916 Vra5g0496 5 5728535 5730916 ECH