Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0489 ATGTCCAATTCGCAACCCTCAGAGTATGATTCAACCGGCGGCGGGGACGAGAGGTCCAACTCTCTCTTAGCCAACGCGCGCTGCAGCTTCTGCTTCACCTGCTGTTTCGGTTCCCGGCACCGCTCAGCCGTCGCCGGATTCGCGTGGTGGGAGCGCGTGCGTGCCACCTCGTCGCTGTCCGAGTCGCACTCCGAACCAGCGACAGGGAGCCCCGCTGCCCGGCGCTGGTGGTCGCCGGGTGCCACCGCCTTCATGAAGGTGCGCGAGTGGTCAGAGCTCGTAGCCGGGCCCCGGTGGAAGACCTTTATCCGGCGGTTCAACCGCAGCCGAAGTGGCGTTTCGCGGCACGCGCCAGGGAAATACCAGTACGACCCCTTGAGTTACGCCTTGAACTTCGACGAGGGGCATAACGGGGATTTTGATGATGAAGGTTACGATGGGTTACGGAATTTCTCCACCCGTTACGCCGCGGCTCCTCCGTTAAAGTCTGTCCCCACGAATTCCAATCAAGACGTCGCCGTTTTGGGCTAG 531 0.6177 MSNSQPSEYDSTGGGDERSNSLLANARCSFCFTCCFGSRHRSAVAGFAWWERVRATSSLSESHSEPATGSPAARRWWSPGATAFMKVREWSELVAGPRWKTFIRRFNRSRSGVSRHAPGKYQYDPLSYALNFDEGHNGDFDDEGYDGLRNFSTRYAAAPPLKSVPTNSNQDVAVLG* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0489 176 PANTHER NHL DOMAIN PROTEIN 8 175 - -
Vra5g0489 176 PANTHER BNAA06G16930D PROTEIN 8 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0489 Vra-Chr5 5609860 5610870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0489 - - gmx:100787218 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0489 5 5609860 5610870 Vra5g0489 5 5609860 5610870 ECH