Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0477 ATGGAGTTTCAGTGCCTTGCATTGTTTTTTTCTCTCATTGTGATACTGATGGCTGCTCAGGCTGCCTTACCTCCAGANGTTTACTGGGAAAGGATGCTTCCAAACACACCANTCCCCAAAGTAATCAGAGAATTTCCCAAGCTAGATGGTGTCAAAGAGATTTCATCACAAGATGTTAGAGAGACTTCATCTCAAAATGCACTCCCTTTCTACTATGTCTATTATAAGAAAAAGGAATTACATGATGGTGTCAGACAGATTTCATCACAAGATGGTTTTGTTTCCATGGATGGTGTAAAGAAAAATCAGTTGAAAGATGATTCCAAAGAAATTCCATCACAAGATGAGACACCTTATGACCCTAAATCAAAGGAAAATGTTGTTCTTCGAGGGATAGACCCAGTGGCTAATCACCATCATCATGATCACTCAAAACCAACTCTATTTTTCTTAGAAGAAGGATTGAGGCGGGGAGCAAAATTGGATCTGTATTTCCCTAAAACAAAATATTTAACCCCGTTGTTGCCCCGGGAAATTACAGAACACTTACCATTCTCATCAGAAAAGATAAATGAAATATTAGAGATTTTGGCTGTGAAGCCAGATTCTAAGAATGCTGAGAATATGGAGGAAACTCTGAAGAACTGTGAAGATCCTGGAATGAATGGTGAAGAAAAACACTGTGCAACTTCATTAGAATCCATGGTAGACTTTGTCACTTCTAAACTTGGCAAGAACGTCCATGTTACTTCTACAGAGGTAGAAATTGAAAGTAAGTCCCAAAAGTTCATAGTTAAAGATGGAGTGAAACTTTTAGCAGAAGAAGAGATAATTGCATGTCACCCAATGGATTACCCATACGTTGTTTTTTATTGCCATAAGATATTAAATAGCACTGCACATTTTATGCCATTGGAGGGAGAAGATGGAAGTAGGGTTAAAGCTGTAGCAATCTGCCACAAAGACACATCAGAATGGGATCCAAACTATATTGCAATGCAAGTTCTCAAAGTGAAGCCTGGGACCAGTCCTGTGTGTCATTTCTTCCCTGACGGTCATCTTCTTTGGTATGCTAAAGAGGGTTAA 1086 0.3877 MEFQCLALFFSLIVILMAAQAALPPXVYWERMLPNTPXPKVIREFPKLDGVKEISSQDVRETSSQNALPFYYVYYKKKELHDGVRQISSQDGFVSMDGVKKNQLKDDSKEIPSQDETPYDPKSKENVVLRGIDPVANHHHHDHSKPTLFFLEEGLRRGAKLDLYFPKTKYLTPLLPREITEHLPFSSEKINEILEILAVKPDSKNAENMEETLKNCEDPGMNGEEKHCATSLESMVDFVTSKLGKNVHVTSTEVEIESKSQKFIVKDGVKLLAEEEIIACHPMDYPYVVFYCHKILNSTAHFMPLEGEDGSRVKAVAICHKDTSEWDPNYIAMQVLKVKPGTSPVCHFFPDGHLLWYAKEG* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0477 361 SMART BURP_2 147 359 IPR004873 -
Vra5g0477 361 ProSiteProfiles BURP domain profile. 149 359 IPR004873 -
Vra5g0477 361 PANTHER BURP DOMAIN PROTEIN RD22 13 357 - -
Vra5g0477 361 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 13 357 IPR044816 -
Vra5g0477 361 Pfam BURP domain 148 357 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0477 Vra-Chr5 5284697 5286748 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0477 - - var:108332058 585.104