Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0468 ATGGGAAATTGCCAAGCCATTGATGCAGCAACACTGGTGATTCAGCATCCGAATGGGAAAGTAGACAAGTTTTATGCACCTGTGAGTGCCACACATGTAATGAAAACCAACCCTGGTCACTATGTTGCTCTTCTCATCTCCTCCACCACATTGTGTCCAACCAAACACATTCAAAATTGCCCCAATAAGAGTGACCACAAAGCTAATATCAACACCAACATCATCAACAACAACAACAACCCAGTTCGTTTAACTCGCATCAAGCTTCTCAAGCCCACCGACAACCTTCTTCTTGGTCAAGTTTACAGGCTCATCACAACAAAAGAAGTCATGAAGGGTCTCAGGGAAAAGCAAAAGGCAAAGATGAGGCCGAACGTGGTAGAGTCAGTTCACAAGCCAGATTTGGAGAAGGAGAAACTGCCAAGGAGGCCTGATATCGAGGACAATAAGGTAATGGCGAAACCTGAAAGAGGTCGAGCAAGGATAACAGCACCAACTAATAATGGTGGTGGTGCCACAGCTAAGACAAGATTTTGGCAACCTTCTTTACAAAGTATCTCAGAGTCTGCCAGCTGA 576 0.4497 MGNCQAIDAATLVIQHPNGKVDKFYAPVSATHVMKTNPGHYVALLISSTTLCPTKHIQNCPNKSDHKANINTNIINNNNNPVRLTRIKLLKPTDNLLLGQVYRLITTKEVMKGLREKQKAKMRPNVVESVHKPDLEKEKLPRRPDIEDNKVMAKPERGRARITAPTNNGGGATAKTRFWQPSLQSISESAS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0468 191 MobiDBLite consensus disorder prediction 166 191 - -
Vra5g0468 191 PANTHER EXPRESSED PROTEIN 1 191 - -
Vra5g0468 191 MobiDBLite consensus disorder prediction 115 191 - -
Vra5g0468 191 PANTHER DUF4228 DOMAIN PROTEIN 1 191 - -
Vra5g0468 191 MobiDBLite consensus disorder prediction 115 157 - -
Vra5g0468 191 Pfam PADRE domain 1 188 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0468 Vra-Chr5 5104589 5105754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0468 - - gmx:100813476 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0468 5 5104589 5105754 Vra5g0468 5 5104589 5105754 ECH
Vra7g1661 7 35122305 35124033 Vra5g0468 5 5104589 5105754 PCT