Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0465 ATGGCGTCACGCGCATTTCTTATGTTGGGGATGCTTCTGCTGGTGTGTCTTGTTAAGGTTTCATCTGATCCGAAGATAGAAGAAGAAACACTAGAAGAAGAACTGCAGTTTCCCAATGAACCACTTGTCATGAGAGACGGGAACAGAAGGCTAATGCAAGAAATAGATTGTGGTGGGTTATGCAAGTCAAGATGCAGTGCTCATTCAAGGCCGAACGTGTGTACTAGGGCATGTGGCACGTGCTGTGTGAGGTGCAAGTGTGTCCCACCTGGTACCTCTGGAAATAGGGAACTCTGTGGAACTTGCTACACTAGCATGACCACCCATGGCAACAAGACTAAGTGCCCTTAG 351 0.4786 MASRAFLMLGMLLLVCLVKVSSDPKIEEETLEEELQFPNEPLVMRDGNRRLMQEIDCGGLCKSRCSAHSRPNVCTRACGTCCVRCKCVPPGTSGNRELCGTCYTSMTTHGNKTKCP* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0465 116 Pfam Gibberellin regulated protein 56 116 IPR003854 -
Vra5g0465 116 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 13 116 - -
Vra5g0465 116 PANTHER GIBBERELLIN-REGULATED PROTEIN 2-RELATED 13 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0465 Vra-Chr5 5045730 5046915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0465 - - gmx:100305516 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0465 5 5045730 5046915 Vra5g0465 5 5045730 5046915 ECH
Vra7g1664 7 35154913 35155929 Vra5g0465 5 5045730 5046915 PCT