Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0460 ATGGGTTGTGTTTTTTCAAGTATTGATGAGGATGAGAAGGTTGGTAGGTGCAAGGAAAGGAAGAGGTTAATGAAACAGTTGGTGAAAATTAGAGGGGATTATTCTGATTCCTTATTGGCTTATTTGAAATCACTGAGAAACACTGGTGCCACCCTGAGGCAATTCACTGAGTCTGATACAATTGAATTTGAAACTGCCTCTAATGGCATAGCTGAGCCAGCTTGTTCATCTCCCAAAGCAGACAAGCTGCTACCACCGCCACTGCCTCCTTTTCTCACTGATAAGAGTATGGTGCACGAAGATGAGATACTAGAGACAGATGACATCAATGTTCCTCCACTGCAAATTGATCCAAGTTTGAGTTCATTACGGCTGTATCGATGCCCTGATAGAAACGAAATGATGGAACCAGTGGAGGAGGATAATTGGGAAGAAACCAAAACAGAATTTGAGGATGAAGATGCAGAAGCTGCTGTAATTGCTGAAAAATTGCGTAGGGGAAAGCAGCAGTTGATGGAGACAGTTGATGAAAATTCCTCTGCAATAAGTTTGTATAGAAAAGATGCTACGGCTACGCCTGTTACAGTTTCTAGATGTGGGAAAACGTTGGAGGGTATAGGTAAGGAGTTGGATGACCAATTCTTGAAAGCATCTGGATGTATAAAGGAAATTGCTGTTCTTATTGATATCAGTGGAGGAGATACTCTTCTGCGACAGAATTCTGGGCGTCATGATAGGAAGAGAGGCAATTCTGCAAAGGTCTTCAGTGTACTGTCATGGAGTAGGCATTCAAAATCACCACCATCCACCAAAGATTGTGCTGAATTTTCTGGTCATAGTGAACCATGCAAGCCTGGAGCTCATTGTGCCACACTTAAAAGATTATACGCGGCAGAGAAGAAACTGTTCAAGGCAGTAAAGGAAGAGGGAATTGTTGCCTTGGAGTTCGATAGAAAGATGTCATTATTGCAAAAACAAGAAGACGAGAACCTTGACATGGTGAAAATTGACAAAACTCGATCATGTGTTGAGAAGTTGGAGTCTGATTTAATAAGCTTACGGCAGTGTATCAGTGACACAACTTCATCAATTTTGGAAATGATAGATGAGGAGCTTTTACCCCAGCTGGTTGCATTAACTGCAGGGTTGGTACAAATGTGGAGAACAATGCGTGAGGCACACGAAGCCCAAATACTCATCTCCCAGCAGTTGAGTAGCCTCAGTGATAGTCACAACACGATACTAAATTCTGAATATCATCACCAGGCTACAATTCAATTCCAAACTGAGGCCTCTTATTGGTATAGCAGCTTTTGCAAACTTGTAAAATCTCAACGGGAGTATGTGAGGATCCTCCATGAATGGATTAAGCTTACCGAAAGCCTCAGGGATGGTCAAGAAAGTAGCAATCATTCTTCTGTTCTTACCATTTGTGAACAGTGGGAGCACGGGCTTAACGACTTACCAGAAAAGGCGACATCTGATGCAATAAAAAGCCTTTTGTCATGCATCCGTTCCATAGCTTCTCAGCAGACAGAGGAACACAACATTCTGAAAAAGTTAGATAAACTTGAAAGGAAATTCCAAAAATGTATGAACAGCTTGGCTGAGATGCAGCAGAGAATAGATGGAGATATAGCTGATACAAGCCCCAGGCATCCAATACATGTCAAGAAAACTGAAACAGAAGAAATTAAGAAGCAAGTGGAGAATGAGAGAGCAAATTATTTGGATGCTGTTCGGTATAGTAGGGCCATGACCCTTGATCAGCTACAAACTACACTTCCCCCACTCTTCCAGTTACTGATGGAATTTTCAAGTGCTTCATCCCATGCTATTCAGCTTATCAATGCCCCCACTGAAGCCGTTTGA 1872 0.4209 MGCVFSSIDEDEKVGRCKERKRLMKQLVKIRGDYSDSLLAYLKSLRNTGATLRQFTESDTIEFETASNGIAEPACSSPKADKLLPPPLPPFLTDKSMVHEDEILETDDINVPPLQIDPSLSSLRLYRCPDRNEMMEPVEEDNWEETKTEFEDEDAEAAVIAEKLRRGKQQLMETVDENSSAISLYRKDATATPVTVSRCGKTLEGIGKELDDQFLKASGCIKEIAVLIDISGGDTLLRQNSGRHDRKRGNSAKVFSVLSWSRHSKSPPSTKDCAEFSGHSEPCKPGAHCATLKRLYAAEKKLFKAVKEEGIVALEFDRKMSLLQKQEDENLDMVKIDKTRSCVEKLESDLISLRQCISDTTSSILEMIDEELLPQLVALTAGLVQMWRTMREAHEAQILISQQLSSLSDSHNTILNSEYHHQATIQFQTEASYWYSSFCKLVKSQREYVRILHEWIKLTESLRDGQESSNHSSVLTICEQWEHGLNDLPEKATSDAIKSLLSCIRSIASQQTEEHNILKKLDKLERKFQKCMNSLAEMQQRIDGDIADTSPRHPIHVKKTETEEIKKQVENERANYLDAVRYSRAMTLDQLQTTLPPLFQLLMEFSSASSHAIQLINAPTEAV* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0460 623 Coils Coil 507 541 - -
Vra5g0460 623 Coils Coil 559 579 - -
Vra5g0460 623 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Vra5g0460 623 PANTHER UNCHARACTERIZED 1 621 - -
Vra5g0460 623 Pfam Protein of unknown function (DUF632) 206 505 IPR006867 -
Vra5g0460 623 PANTHER REDUCTASE SUBUNIT C, PUTATIVE (DUF630 AND DUF632)-RELATED 1 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0460 Vra-Chr5 4865031 4870712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0460 1 60 Acyl Lipid Metabolism Gene Families AT2G27090 36.667 1.79e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0460 - - gmx:100809759 940.643