Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra5g0456 | ATGGCAACCACTGCAATCACCACTCTCCCCCAATTCACTGGTCTCAGACCCCAATTCTCAGCTGCCCCTGTGCAGAACTTGGTTGCTGTGCAACCCATGAGGCGTAAGGGGAAGGGTGGTTTGGGAGTTCGATGTGACTACATTGGTTCATCCACTAATCTGATTATGGTGGCTTCTACAAGCCTGATGCTGTTTGCTGGAAGGTTTGGATTGGCTCCATCAGCGAACAGGAAAGCCACTGCAGGGCTAAAGCTGGAGGTTAGGGACTCAGGCTTGCAGACTGGTGACCCTGCTGGGTTCACCCTTGCAGACACCTTGGCCTGTGGTGCTGTTGGCCACATCATTGGAGTTGGGGTTGTTCTTGGTCTCAAGAACATTGGTGCACTTTAA | 390 | 0.5231 | MATTAITTLPQFTGLRPQFSAAPVQNLVAVQPMRRKGKGGLGVRCDYIGSSTNLIMVASTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGAVGHIIGVGVVLGLKNIGAL* | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra5g0456 | 129 | Gene3D | - | 46 | 129 | IPR023618 | GO:0009522|GO:0015979 | |
| Vra5g0456 | 129 | PANTHER | PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC | 1 | 129 | - | - | |
| Vra5g0456 | 129 | PIRSF | PsaK | 1 | 129 | IPR016370 | - | |
| Vra5g0456 | 129 | TIGRFAM | PS_I_psaK_plant: photosystem I reaction center PsaK | 47 | 129 | IPR017493 | - | |
| Vra5g0456 | 129 | PANTHER | PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED | 1 | 129 | IPR016370 | - | |
| Vra5g0456 | 129 | SUPERFAMILY | Photosystem I reaction center subunit X, PsaK | 97 | 123 | IPR035982 | GO:0009522|GO:0015979|GO:0016020 | |
| Vra5g0456 | 129 | Pfam | Photosystem I psaG / psaK | 51 | 127 | IPR000549 | GO:0009522|GO:0015979|GO:0016020 | |
| Vra5g0456 | 129 | ProSitePatterns | Photosystem I psaG and psaK proteins signature. | 99 | 116 | IPR000549 | GO:0009522|GO:0015979|GO:0016020 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra5g0456 | K02698 | - | gmx:100527056 | 226.483 |