Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0438 ATGGGAGTTGGAAGTTGCCGCCATGTGTTGTTCTCTTTGTTTCTTCTCTTCAGTTTAGGTCTAGGTAAAGCCATAAGATTAAGAGAGGAAGAAAACCAAGAAATCTCATATGAATTTGGTACCAAGTTGGATGCAGTTCCTGTAGTCAACCCTACAACTCCAGGCACAGCAAATCCATATCCTACACTAAACCCAACAACTCCTCAAGCACCTGGCACAATAGGACAAACCCCATTAACTCCTACAACCCCATACATGACTCCCATAAACCCATACGCAAACCCCACAACCCCAAAAACAAGTCCTACAAATCCAACTATGGTCCCACCTAGCCCTATTACAACCACTACTCCCACAACCCCAACCACTCCTGCTACTGCATCAGCAGGTGGTCAGTGGTGTGTTGCCAGCCAATCAGCTGCAGAGAGCACTCTGAAGGTGGCTCTTGACTATGCTTGTGGCTATGGTGCAGACTGTTCAGCAATTCAACCTGGAGCAGGTTGCTACAATCCAAATACTCTGAAAGACCATGCTTCTTATGCATTTAATGACTACTACCAGAAGAATCCAGCTTCTACAAGCTGTGCATTCGGAGGAACTGCTGTACTTACAAACAAGGATCCCAGTAATGGGAACTGCCGCTATACATCATCCAAAACACCCATCATGAGTCCACCAACACCAACTTATGTAAGCCCCCCAACTCCACCAAGCACTATGACTCCAACTACCCCAAGTACCATGAATCCAACTACCCCAAGTACCATGACTCCAACTACACCAGGTATTATGACACCAACTGCACCAGGTATGACAACAATTCCTGGTGGAGCATCAGTGTATGGTTCGGGACCAACAGGAAGCCCCAATATAGCCACATCTGTTTCACACTCTGAATTGCTGTTATTTACCTTATTTGGCTTGTGGGCTTCACTTCATGTACAAAACTACACCTAG 957 0.4598 MGVGSCRHVLFSLFLLFSLGLGKAIRLREEENQEISYEFGTKLDAVPVVNPTTPGTANPYPTLNPTTPQAPGTIGQTPLTPTTPYMTPINPYANPTTPKTSPTNPTMVPPSPITTTTPTTPTTPATASAGGQWCVASQSAAESTLKVALDYACGYGADCSAIQPGAGCYNPNTLKDHASYAFNDYYQKNPASTSCAFGGTAVLTNKDPSNGNCRYTSSKTPIMSPPTPTYVSPPTPPSTMTPTTPSTMNPTTPSTMTPTTPGIMTPTAPGMTTIPGGASVYGSGPTGSPNIATSVSHSELLLFTLFGLWASLHVQNYT* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0438 318 Gene3D - 128 224 - -
Vra5g0438 318 PANTHER BETA-1,3 GLUCANASE 13 309 - -
Vra5g0438 318 MobiDBLite consensus disorder prediction 224 256 - -
Vra5g0438 318 PANTHER BETA-1,3 GLUCANASE 13 309 IPR044788 -
Vra5g0438 318 SMART X8_cls 132 215 IPR012946 -
Vra5g0438 318 PRINTS Proline rich extensin signature 47 63 - -
Vra5g0438 318 PRINTS Proline rich extensin signature 84 105 - -
Vra5g0438 318 PRINTS Proline rich extensin signature 105 121 - -
Vra5g0438 318 PRINTS Proline rich extensin signature 216 241 - -
Vra5g0438 318 Pfam X8 domain 132 201 IPR012946 -
Vra5g0438 318 MobiDBLite consensus disorder prediction 226 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0438 Vra-Chr5 4603518 4605985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0438 133 215 Glycoside Hydrolase AT2G05790 55.294 3.03e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0438 - - gmx:102659696 416.772