Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0431 ATGGATCTTGATGGGGCGAGTTCACCAACAGTTAGCACAGGAGTGCAGGAAATTCCAGGACGTTCAACACAACGTGGTGCATTCTATCAGTTTACACAGCAGAATCTTCCAGCATGTAAACCTGTGCTAACACCTGCAGCAATCATTGCTACATTTCTATTGATGGGTTTAATTTTCATTCCGATTGGACTTGTTACACTTCGTGCCTCAAATAGTGTTGTTGAAATTGTTGATAGGTATGACATGGATTGTATACCTGAAGAATATAGAAATAACAAGGTCGCATATATTAAAGATGACTTAATCTCCAAAAACTGTTCACGATTCTTAAAGGTACTTAAGCCAATGAAAGCACCAATTTATATCTATTACCAGCTTGATAACTATTACCAAAACCACCGACGGTATGTCAAAAGTAGAAGTGACCTGCAGCTCTTACATGGACTTGGATACAATGACACCAGTTCTTGTAAACCTTTAGAGTCTTCCCATAATCTTCCAGTTGTACCTTGTGGGTTGATAGCGTGGAGTTTGTTCAATGATACATATAAATTCAGTCGTGGGCCATCAGAGTTGAAGGTCAATCGGAAGAATATTGCTTGGAAGAGTGATCGTGATCATAAATTTGGAAAACATGTTTACCCATTTAATTTTCAAAATGGGACTTTGATTGGGGGTGGAAAGCTAGATCCAAGTATTCCTCTTGGTGATCAAGAAGATCTCATTGTTTGGATGAGGACTGCTGCTCTCCCCAGCTTCAGAAAGTTATATGGTAGAATTGAAGAGGATTTGGATGTAGATGATGTTATAGTAGTCCACCTGAAAAATAACTATAACACTTACAGTTTTGGTGGAAAGAAGAAGCTTGTTCTGTCAACATCAAGCTGGTTGGGTGGAAAAAATGACTTCCTCGGAGTTGCAAATTTATTTGTTGGCGCCTTTTGTATATTCATCTCCATCATCTTCCTGTTGCTTCATATGAAAAATCCTAGGACAGACCTTATGGGGACATGGCCTACTTATCTTGGAATAGGAAAAACATTGCCAGTTGATAAAGGACATGGTATGGTACACTGGTTGTACTTTTCTTAA 1092 0.3883 MDLDGASSPTVSTGVQEIPGRSTQRGAFYQFTQQNLPACKPVLTPAAIIATFLLMGLIFIPIGLVTLRASNSVVEIVDRYDMDCIPEEYRNNKVAYIKDDLISKNCSRFLKVLKPMKAPIYIYYQLDNYYQNHRRYVKSRSDLQLLHGLGYNDTSSCKPLESSHNLPVVPCGLIAWSLFNDTYKFSRGPSELKVNRKNIAWKSDRDHKFGKHVYPFNFQNGTLIGGGKLDPSIPLGDQEDLIVWMRTAALPSFRKLYGRIEEDLDVDDVIVVHLKNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVANLFVGAFCIFISIIFLLLHMKNPRTDLMGTWPTYLGIGKTLPVDKGHGMVHWLYFS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0431 363 PANTHER ALA-INTERACTING SUBUNIT 2-RELATED 11 334 - -
Vra5g0431 363 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 67 331 IPR005045 GO:0016020
Vra5g0431 363 PANTHER CELL CYCLE CONTROL PROTEIN 50 11 334 IPR005045 GO:0016020
Vra5g0431 363 PIRSF Lem3/Cdc50 7 336 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0431 Vra-Chr5 4507995 4516040 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0431 - - gmx:100789806 615.535