Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0426 ATGGCGAAACTGAAGATAGGAGGAACGTGGGCAGGGGTGGTGGAAGAGGTGGACCTCCACGGCTGGACCCTCGCCATGCTCCGCGATTGCGTCGCCGAGCGATCCAACTCTCCGTCGCAGTCCATCAACCTCATCTGCGCCGGCAAGATTCTCCGAGACGACGCCGTTCCACCTCAAACCCTCTCCCAACTCGGCATAAAAAACAACGCTAAGATTCTCGCCACGCGCGCCTCCTCTCCGCAGCAGGGAATATCCCTCGTCGCGGAGGAAGAGCGTTGTTCCAGACTAGCGCGTATCAGGGCTGCTGCGACTGCGATGGCGGAACGCCACTCGGATGGTGCGTTGCCGATTGAGGACTTCAATATAGAAGTTGAGGATCAGAGTGGACAGAAAGTGCGGTTAGGCTCTGAGACTGATCAAAGGGCGGTGATGATGGGACTGATGCTTCACGCGAAGGGGAAGAAACTTATCAAACAGGGGAATTACAAAGATGCGCTGGAAGTGCTCAGCATGGGAGAGGAGTCATTCTCTCTTTGTGATTCAAAAGTCATTGAGCTTATTGACAATGTTCCTATACTACAAATAGACATGGTATGGTGCTATTTTATGATACAAGACATCAGATGGCTCGCAGACGCAGGAAAGCGTCTTGAAATAGCTAGGATAGGAATTGAACGGGCTCATGGAAAGGATTCTCTTCGCCTGAGGCTCTTACAAGGTGGTCGATTTCCAGAACTTGCACTGCATTTGAGACTAGAGCTGCTTGAAGGGGTAGTGGCATATCATACCGGGCAGTTAGAGAAATCCAGAAAAGCATTAGCCTCTGCAAGAGTTAAGTTTGAACAGCTGCAAGTGTCAGATGAAGCCTTGTCATTTGTTATGAGCATGGGCTATGTTGAACGTGATGCAAAGCGAGCATTGCGGATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGCTGAGGAGAAAGCAAAGAAATTGCAAAAGCGGGAGGAGGATATGAGGAGAAGAAATGAAATTAAGGAACAAAAGCGGTATGGAATGACACCCTTAAAGAAAGCTGTGGATCTAGAGAGATTGAAGGAATTGGTCTCTATTGGGTTTGAGAAGGAGCTTGCTGCTGAAGCTCTTAGACAAAATGAAAATGATACTCAGAAGGCATTGGATGATTTGACGAATCCTGTAACTAATTCAGCTTTACAGGTTTCGATCGAGTCAAGGAAAAGTAAGAGACAGAAACAAGCAAAAGATTATGAAATTGAGAAAGTTGTGCGAATGGGTTTTGAAAGAGCAAGAGTTGTTGCTGCTTTTGAGGCGGGAGGTGGTGTAGAACAAGTTTTGCTAAGACTGACAGAACAATCTGGGATCGAACCCACATCAGCTTCCATAAATACACATTCAACGGCCGGCCCCAATGGTGATGCTAGTTCATCTGCTCCATTACCTAACAATGATAATTCTGATGATCATCTAAGCACGATGAATGAGGTTGAAGACAGTAAAACACAACGAGATATAGAAATGGAAGACGAGCTATCTGCAGATATTGCAAAAGCAGATGCCTTTGCTGATTATGACATTGAAGTTAATGTAGAAGGAGAAGCCATAACTCAGTACCTGGCCCTGGTTGAGTCAGCAGGGACTTGTGGCCAAACTGCTCCTTCCCAGTAG 1677 0.4699 MAKLKIGGTWAGVVEEVDLHGWTLAMLRDCVAERSNSPSQSINLICAGKILRDDAVPPQTLSQLGIKNNAKILATRASSPQQGISLVAEEERCSRLARIRAAATAMAERHSDGALPIEDFNIEVEDQSGQKVRLGSETDQRAVMMGLMLHAKGKKLIKQGNYKDALEVLSMGEESFSLCDSKVIELIDNVPILQIDMVWCYFMIQDIRWLADAGKRLEIARIGIERAHGKDSLRLRLLQGGRFPELALHLRLELLEGVVAYHTGQLEKSRKALASARVKFEQLQVSDEALSFVMSMGYVERDAKRALRMNNQDVGGAIDFLAEEKAKKLQKREEDMRRRNEIKEQKRYGMTPLKKAVDLERLKELVSIGFEKELAAEALRQNENDTQKALDDLTNPVTNSALQVSIESRKSKRQKQAKDYEIEKVVRMGFERARVVAAFEAGGGVEQVLLRLTEQSGIEPTSASINTHSTAGPNGDASSSAPLPNNDNSDDHLSTMNEVEDSKTQRDIEMEDELSADIAKADAFADYDIEVNVEGEAITQYLALVESAGTCGQTAPSQ* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0426 558 Gene3D - 16 83 - -
Vra5g0426 558 SMART uba_6 418 454 IPR015940 -
Vra5g0426 558 SMART uba_6 286 323 IPR015940 -
Vra5g0426 558 SMART uba_6 358 395 IPR015940 -
Vra5g0426 558 Gene3D - 286 325 - -
Vra5g0426 558 Gene3D - 359 396 - -
Vra5g0426 558 SUPERFAMILY UBA-like 347 396 IPR009060 GO:0005515
Vra5g0426 558 ProSiteProfiles Ubiquitin domain profile. 23 72 IPR000626 GO:0005515
Vra5g0426 558 MobiDBLite consensus disorder prediction 461 492 - -
Vra5g0426 558 CDD UBA 362 391 - -
Vra5g0426 558 Coils Coil 326 346 - -
Vra5g0426 558 MobiDBLite consensus disorder prediction 493 507 - -
Vra5g0426 558 MobiDBLite consensus disorder prediction 461 507 - -
Vra5g0426 558 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 284 324 IPR015940 -
Vra5g0426 558 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 356 396 IPR015940 -
Vra5g0426 558 SUPERFAMILY UBA-like 279 324 IPR009060 GO:0005515
Vra5g0426 558 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 548 IPR039749 -
Vra5g0426 558 SUPERFAMILY Ubiquitin-like 21 75 IPR029071 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0426 - - gmx:100792972 875.159