Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0425 ATGGACTGGTTCTCCTGGTTGTCCAGGACCAGCCTAGAACCCTCCCTCATCTACGACTACGGCCTTGCCTTCGCCCGCAATGAGCTTCAGTTGGAAGATGCCACCTACTTCAACCACGAATTTCTTCAGAGCATGGGCATTTCCATCGCCAAACACAGGCTCGAAATCCTCAAGCTTGCCAAAAAAGAAGATGGGGCACTCAAAAGCAACAAGCTTTCTGGGGTCATCAAGAAGTGTCTGAAGAAGTGCTTCAGCCTGGTTTCGCGTGATGATCATCAAGAAGCGATGATGACGATGATGAAGGAGATGCCACCCGAGCCAAACTGGTACCAAGGGAAGTGGAGAAGGGCCAGGCACAAGAATGGGAGTGAGGAACTCAAGGGAGAGAATAAGGGAGTGGTGCAGAGAAGCAGGAACATCGCACTGTCAGGGCCTTTGGATGGAACAAATGGAAGAGTATTGCATGAGAAGATGGTGAACAACAGCAAGTTTATGAAGTTGTCTGGTCCTCTTGATGGGAAGGTCAATGGCTGTGAGAGAGTGGTGTTTGCAAATGCAAATAGAAGTCCTATAATGAGTTCTGCTCCTTCTAGGCCTCTTGATGGAAGGTTCATCGGCACAGCAAAAAGTCCAAGGCTTTCTGGGCCACTTGATGCAAGAGCAGTCGTCTGTAATAGAAGTCCAAGGTTACCTAGACCTTTAGATGAGAGGGCCGAGAGCCCAATGGGGTACAGTCCCTACAGTAAGGTCAGAGCTGATGCAGCAGCAGATTATGATGATGATTATGCAATTTGGCCTACATTGTTTGAGGATCTTAAACCAACTTAG 828 0.4843 MDWFSWLSRTSLEPSLIYDYGLAFARNELQLEDATYFNHEFLQSMGISIAKHRLEILKLAKKEDGALKSNKLSGVIKKCLKKCFSLVSRDDHQEAMMTMMKEMPPEPNWYQGKWRRARHKNGSEELKGENKGVVQRSRNIALSGPLDGTNGRVLHEKMVNNSKFMKLSGPLDGKVNGCERVVFANANRSPIMSSAPSRPLDGRFIGTAKSPRLSGPLDARAVVCNRSPRLPRPLDERAESPMGYSPYSKVRADAAADYDDDYAIWPTLFEDLKPT* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0425 275 PANTHER OSJNBA0033G05.11 PROTEIN 1 275 - -
Vra5g0425 275 CDD SAM_superfamily 2 62 - -
Vra5g0425 275 PANTHER STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN 1 275 - -
Vra5g0425 275 Gene3D - 1 68 IPR013761 -
Vra5g0425 275 SUPERFAMILY SAM/Pointed domain 5 61 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0425 Vra-Chr5 4436473 4438141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0425 - - gmx:100805121 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2326 7 43333574 43335239 Vra5g0425 5 4436473 4438141 PCT