Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0416 ATGGCTTCCTTAAGCTCCCTAGTTCTGCTTCTTGCAGTTCTGGTTCTGTCCCCTCAAGGGCTTGCTAACTATGACAAGCCCCCCATTGAGAAACCACCTGTTTACAAACCCCCAGTTGAGAAGCCACCGGTCTATAAACCACCTGTAGAAAAACCACCGGTTTACAAGCCACCGGTCCACAAACCACCAGTGTACAAGCCCCCAGTAGAAAAGCCACCGGTGTACAAGCCCCCAGTAGAAAAGCCACCGGTGTACAAGCCCCCAGTAGAAAAACCACCGGTGTACAAGCCTCCAGTAGAGAAACCACCGGTGTACAAACCCCCAGTTGAGAAACCACCGGTTTACAAGCCCCCCGTGGAGAAGCCACCAGTGTACAAACCCCCAGTAGAGAAACCACCAGTGTACAAACCCCCAGTTGAAAAACCACCGGTGTACAAGCCCCCAGTTGAGAAACCACCCGTGTACAAACCCCCAGTTGAGAAGCCACCCGTGTACAAACCCCCAGTTGAAAAACCACCAGTTTACAAGCCTCCTGTGGAGAAGCCACCAGTGTACAAGCCACCAGTTGAAAAACCACCAGTGTACAAGCCCCCAGTAGAGAAGCCACCGGTGTACAAGCCTCCCGTTGAAAAGCCTCCGGTCTACAAGCCCCCGGTAGAGAAGCCACCAGTGTACAAGCCTCCAGTTGAAAAACCACCAGTGTATAAGCCCCCTGTGGAGAAGCCACCGGTGTACAAACCCCCAGTTGAAAAACCACCAGTTTACAAGCCACCGGTGTACACGCCACCGTACGGGAAGCCACCTCACCCAAAGTACCCTCCAAGCTCGAACTGA 834 0.5336 MASLSSLVLLLAVLVLSPQGLANYDKPPIEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVHKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVYTPPYGKPPHPKYPPSSN* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0416 277 PANTHER EARLY NODULIN-11 176 273 - -
Vra5g0416 277 PANTHER EARLY NODULIN-11 1 204 - -
Vra5g0416 277 MobiDBLite consensus disorder prediction 49 277 - -
Vra5g0416 277 Pfam Extensin-like protein repeat 232 241 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 142 151 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 102 111 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 172 181 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 92 101 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 112 121 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 132 141 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 252 260 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 202 211 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 212 221 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 192 201 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 52 61 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 162 171 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 222 231 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 42 51 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 32 41 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 242 251 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 62 71 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 82 91 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 72 81 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 182 191 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 152 161 IPR003883 GO:0005199
Vra5g0416 277 Pfam Extensin-like protein repeat 122 131 IPR003883 GO:0005199
Vra5g0416 277 PRINTS Adhesive plaque protein signature 56 77 IPR002964 GO:0005576
Vra5g0416 277 PRINTS Adhesive plaque protein signature 95 112 IPR002964 GO:0005576
Vra5g0416 277 PRINTS Adhesive plaque protein signature 121 140 IPR002964 GO:0005576
Vra5g0416 277 PANTHER - 1 204 - -
Vra5g0416 277 PANTHER - 176 273 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0416 - K05206 vra:106760994 34.2686