Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0415 ATGGCTTCTTTAAGCTCCCTAGTTCTGCTACTTGCAGCTTTTCTTCTGTCCCCTCATGTGCTTGCTAACTATGAGAAGCCCCCAGTAGAAAAACCTCCTGTCTACAAGCCTCCCGTTGAGAAGCCACCTGTGTACCAACCCCCAGTTCAAAAACCACCAGTAGAAAAACCACCCGTTGAGAAACCACCCGTTTATAAGCCACCGGTTGAGAAACCACCCGTTTACAAGCCACCGGTTGAGAAACCACCCGTTTACAAGCCCCCGGTTGAGAAACCACCAGTTTACAAACCCCCAGTTGAGAAACCACCAGTTTACAAGCCACCGTACGGAAAGCCACCTGTGCATGAGTCTCAATATGAGAAACCACCAGCGTACAAGCCCCCTGTTGAGAAGCCACCGGTGCACAAGCCCCCAGTTGAGAAACCACCGGTTTACAAGCCTCCGGTGGAGAAACCACCAGTGTACAAGCCACCGGTTTACAAGCCCCCAGTGGAGAAGCCACCGGTGCATAAGCCACCATATGGGAAGCCACCTTACCCAAAGTACCCTCCAACTGATCGCACCCGTTGA 570 0.5228 MASLSSLVLLLAAFLLSPHVLANYEKPPVEKPPVYKPPVEKPPVYQPPVQKPPVEKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPYGKPPVHESQYEKPPAYKPPVEKPPVHKPPVEKPPVYKPPVEKPPVYKPPVYKPPVEKPPVHKPPYGKPPYPKYPPTDRTR* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0415 189 PANTHER EARLY NODULIN-11 1 183 - -
Vra5g0415 189 MobiDBLite consensus disorder prediction 30 110 - -
Vra5g0415 189 PRINTS Adhesive plaque protein signature 56 77 IPR002964 GO:0005576
Vra5g0415 189 PRINTS Adhesive plaque protein signature 95 112 IPR002964 GO:0005576
Vra5g0415 189 PRINTS Adhesive plaque protein signature 141 160 IPR002964 GO:0005576
Vra5g0415 189 Pfam Extensin-like protein repeat 157 166 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 62 71 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 142 151 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 92 101 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 152 161 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 132 141 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 32 41 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 72 81 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 167 174 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 102 109 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 122 131 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 52 61 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 82 91 IPR003883 GO:0005199
Vra5g0415 189 Pfam Extensin-like protein repeat 42 51 IPR003883 GO:0005199
Vra5g0415 189 MobiDBLite consensus disorder prediction 25 189 - -
Vra5g0415 189 PANTHER - 1 183 - -
Vra5g0415 189 MobiDBLite consensus disorder prediction 125 189 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0415 - K01050 var:108330173 43.5134