Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0395 ATGATAAACACCGCACCCAGCTGCTCCTTCCACCGCACCACCACTCTCACAACCTCTCATTCTCTTCCATTCACTCCCCTTCACCATTCATGTCTACACCACTGCCACTTCTCCTTCGGCACACAACTTCTCCGATTAAGCAACCTCCGCTGCCACACACTATCGCCGTTAACCACCAAGACGCTCAAAGTGAATTGCTCCATCAGCGATCCTCTGAAGGTGATGATATCAGGTGCACCTGCTTCCGGCAAAGGCACGCAATGTGAATTAATTTTCCAAAGGTTTGGATTGGTGCACATATCAACAGGGGATTTGCTAAGAGCAGAAGTGGCAACTGGAACTGAAATTGGAAATAAAGCAAAGGAGTTCATGAACTCGGGCCAACTGGTTCCTGATGAAATTGTGACAGCAATGGTGGCAGCACGATTGTCTCTCGAAGATGCTAAGCAAAAAGGGTGGCTTCTTGATGGGTACCCTCGAAGTTTGGGCCAGGCCCAGAGTCTGGAGAAAATGCAGATACGACCTGATGTCTATATAGTATTGGATGTTCCTGATGAAATTCTGATCGACAGATGTGTTGGTAGAAGGCTTGACCCAGTGACAGGGAAGATATACCATCTAACTTTTTTTCCACCGGAGACGGAAGAGATTAAAGCAAGGCTGGTAACTCGACCTGACGACACTGAGGAGAAGGTGAAATCTCGCCTCAACATATACAAGCAAAATGCAGAAGCCGTATCTTCCTCCTACTCAAATATAATTCATAAGATTGATGGCAGCAATTCAAAAGAAGCGGTTTTCAAAGAAATTGAATCTTTGCTATCTCAATTGCAACAGAAAAAAGTAAAGCTAGTGAAATCTGGAGAAAAATCAATCCTTGATACAAAGAAAGGACGGCCATCTTTGAGCCAGGATAAGTGGAGAGGGATTCCTACTAGACTAAACAATATTCCCCATTCTCGAGAAATCAGGAAATATTTCTATGATGATGTGTTACAAGCTACTGAGAGGGCTATCAATGACGGTAAAACTAGGTTGAAGGTTGACATCAACATTCCTGAGCTGAACCCAGAAATGGATGTTTATCGAATAGGTACCTTGATGGAACTTGTTCGAGCTCTTGCCCTCTCTTTTGCGGATGATGGAAAACGGGTTAAGGTTTGTGTACAAGGGTCGATGGGAGATGGTGCTCTTGCTGGAATGCCATTGCAGCTTGCTGGAACTCGTAAGATTTTAGAGTTCATGGACTGGGGTGATTATGGAGCAAAAGGAACCTTCATCAATATTGGTTCTATAGGTGCTGCTGAGGTTGAGGAGCAAGATGACATGTTTATCTTGGTGGCTCCTCAAAATGCTGTTGGGAATTGTATTATTGATGATCTCAGAGCCATGACCAACGCAGCTGAACACAGACCAGTTATTCTAGTCAATGCTAGGCTTAAGGATTTGCCTGGTTCTAGTGGTATAATGCAAACGATGGGGAGGGACCAGAGACTCAAGTATGCAGCATCTTTTGAAAGTTGCTACTTCTTTCGACTTCTGTATTATGCAGGAACGCAGTATCCCATAATGGGAGCTATCAGAATGACTTACCCAAACCAATATGAGCTGTACAAGAGGGTAGATGAATCGCCTGGGAAGGAGAAGTATGCTATTCTGTCTACGTTTACCCAGAGGCCTAGTACAGATGAAATTAACGATGCTTTCCAAGGAAAACCAAGTAACGAATCTAGGAAAACCTCAGGGATTTGGGGCTTCTTGAGTGGCATACTCTGA 1776 0.4431 MINTAPSCSFHRTTTLTTSHSLPFTPLHHSCLHHCHFSFGTQLLRLSNLRCHTLSPLTTKTLKVNCSISDPLKVMISGAPASGKGTQCELIFQRFGLVHISTGDLLRAEVATGTEIGNKAKEFMNSGQLVPDEIVTAMVAARLSLEDAKQKGWLLDGYPRSLGQAQSLEKMQIRPDVYIVLDVPDEILIDRCVGRRLDPVTGKIYHLTFFPPETEEIKARLVTRPDDTEEKVKSRLNIYKQNAEAVSSSYSNIIHKIDGSNSKEAVFKEIESLLSQLQQKKVKLVKSGEKSILDTKKGRPSLSQDKWRGIPTRLNNIPHSREIRKYFYDDVLQATERAINDGKTRLKVDINIPELNPEMDVYRIGTLMELVRALALSFADDGKRVKVCVQGSMGDGALAGMPLQLAGTRKILEFMDWGDYGAKGTFINIGSIGAAEVEEQDDMFILVAPQNAVGNCIIDDLRAMTNAAEHRPVILVNARLKDLPGSSGIMQTMGRDQRLKYAASFESCYFFRLLYYAGTQYPIMGAIRMTYPNQYELYKRVDESPGKEKYAILSTFTQRPSTDEINDAFQGKPSNESRKTSGIWGFLSGIL* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0395 591 Gene3D - 67 288 IPR027417 -
Vra5g0395 591 PANTHER NUCLEOTIDE KINASE 10 481 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra5g0395 591 Hamap Adenylate kinase [adk]. 72 275 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra5g0395 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 276 IPR027417 -
Vra5g0395 591 Pfam Adenylate kinase 76 252 - -
Vra5g0395 591 ProSitePatterns Adenylate kinase signature. 153 164 IPR033690 -
Vra5g0395 591 PANTHER ADENYLATE KINASE 5, CHLOROPLASTIC 10 481 - -
Vra5g0395 591 CDD ADK 73 266 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra5g0395 591 PRINTS Adenylate kinase signature 75 88 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra5g0395 591 PRINTS Adenylate kinase signature 103 117 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra5g0395 591 PRINTS Adenylate kinase signature 153 169 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra5g0395 591 PRINTS Adenylate kinase signature 224 239 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra5g0395 591 Pfam Domain of unknown function (DUF1995) 324 566 IPR018962 -
Vra5g0395 591 TIGRFAM adk: adenylate kinase 73 274 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0395 Vra-Chr5 4098551 4114335 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0395 K00939 - gmx:100818830 1022.69