Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0390 ATGGAAGCGTCGTCGAGTGGAGAAGCCTCTGAGCGCGGCGGCGAAGAGAAAGGAACATTCCAATACTTTGGTTGGGTTTATCACGTTGGCGTCAATTCCGTCGGCCGCGAGTACTGCCACCTCCGATTCCTCTTGCTCAGAGGCAAGTGCGTTGCCATGTACAAGCGTGATCCTCACCAGAACCCTGACATTAAACCCATCCGACAGGGAGTCATAGGAGCCACACTAGTGGTCGAGGATCTAGGATGTCGGAAGGTCAACAATGGGGATCTTTATGTAGTACGATTCTACAGTCGACAAGAAGAGGGTAGAAAAGGAGAAATTGCTTGTGCCACAGCTGAGGAAGCTCAGAGATGGATGGAAGCGTTTCTTCATGCCAGGCAACAGGCAGAGCATGATCTATTAACAGAAAGTGACAGAGATAAACTAATGCACGAAATGGAGATCGATCTACAAGGAAATCGACATAAACTGAAACGATATGCCTCTGGGTTGAAGAAGCTTAAAAAAATTGGCCAAGGCCCAGAGACACTTTTACGTCTATCGTCAAAGTTTTTTGGTAATTCAGATTGCTTTGAAGGGGAAACTGGAGATGTATTTGATATACATCAATGGAAATGTGTTCGTACTATGTCGGGGATTAGAATCTTTGAGGATGTTTCCGATCACAAGAGTGGTAAGGGAGCCCTTGTTAAGTCTGTTGGTGTTATTGATGCGCCTGCAGATAGTGTGTTTGAAGTGTTTTTAAACACTGAGCGACAAAAAAGATACGAGTGGGATATGTTAATGGGTGACTTGGAGTTGGTAGAGACTTATGATGGACATTATGATGTTGTTTATGGAACATATGATCCTAAGTATCTAACTCGGTGGCATTCAAAGCGGGATTTTATCTTCTCTAGGCAATGGTTTCGGTCACAAGATGGAACATACACTATCTTGCAATTTCCATCCATTCATAAAAAAAAGCCTCCAAGATCAGGATATCGACGTACAAAAATTAATCCATCTACGTGGGAAATCAGAAATTTAAACACACCAATGGGATCTGACAGACCAAGATGTTTAGTGTCCCACACTTTGGAAATAAACTCAGCATCCTGGTATCGGTGGAAGAACAGCCAACAGAACACAAAATTTGAGAAGAGCGTCCCGTATGCCTTGTTGTGCCAAGTCGCAGGTCTAAAGGAATACATTGGAGCCAATCCAGCACTCCTCCAGCAATATGCCTCTAATGCTGTTCGTTCGCATAGCTCCCATCCCTCTCTCACCAGTTCTGACTTTGCAGATGATATACAAGATGAGTTTTATGATGCAATCGCTGCCGAGTCATCGTCAGATGATGATACTGATGACGATAAAGGGTCTGATCAGGAGCACAAAGTCAAATTAAAGAATGTTTCTTGGGCCATGTCAACCTTGGCTGTGAAGCGAGGTGCAGCTTCAGATGCAAGCAAAGAATTAGATCCGGATGCAAGTTGTATCACAATTGATGTGAGTGGCATGCACGGCTCGTTGCGCAGAGGTGAAGGTGACAAGGATACAGACTGTTGGACTTGTCCTGGTGGTGAAGGCTTTATGATTAGAGGAAAGAACTATCTGAAAGATAATTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAAGCTCATAGCAGTAGATTGGTTAAAAGTTGACAAAGCTGCAGACAGAATTGCACTGCATCATAGAAATTTGGTCCAGTCGGAAGCTGGGAAAAGTCTACCATTTATCCTTGTATTCAATCTACAGGTTCCAGCTAAACCAAACTACAGCTTGGTTTTATATTATGCATCTGACAGACCTGTAAAGAAAGATTCTCTATTGGCAAAGTTTTTGGATGGGGATGACGCGTTTCGTGACACAAGATTCAAACTGATTCCAAGCATAGTTGAGGGATATTGGATGGTCAAGCGAGCTGTCGGAACAAAAGCTTGCCTGCTGGGGAAAGCTGTCACTTGTAAATACTTTAAGCAAGACAATTTTTTTGAGATAGATGTAGATATTGGATCATCTTCTGTAGCTAGAAGTGTCATTGGCCTTGTTCTGGGATATGTCACAAGCCTGGTCGTTGACCTTGCAATTTTGATAGAGGCAAAAGAAGAATCAGAGCTGCCAGAGTACTTACTTGGAACTGTACGATTAAACCGCTTGAAACCTGAATCTGCTGAGCCGTTAGAGGATTGA 2202 0.4346 MEASSSGEASERGGEEKGTFQYFGWVYHVGVNSVGREYCHLRFLLLRGKCVAMYKRDPHQNPDIKPIRQGVIGATLVVEDLGCRKVNNGDLYVVRFYSRQEEGRKGEIACATAEEAQRWMEAFLHARQQAEHDLLTESDRDKLMHEMEIDLQGNRHKLKRYASGLKKLKKIGQGPETLLRLSSKFFGNSDCFEGETGDVFDIHQWKCVRTMSGIRIFEDVSDHKSGKGALVKSVGVIDAPADSVFEVFLNTERQKRYEWDMLMGDLELVETYDGHYDVVYGTYDPKYLTRWHSKRDFIFSRQWFRSQDGTYTILQFPSIHKKKPPRSGYRRTKINPSTWEIRNLNTPMGSDRPRCLVSHTLEINSASWYRWKNSQQNTKFEKSVPYALLCQVAGLKEYIGANPALLQQYASNAVRSHSSHPSLTSSDFADDIQDEFYDAIAAESSSDDDTDDDKGSDQEHKVKLKNVSWAMSTLAVKRGAASDASKELDPDASCITIDVSGMHGSLRRGEGDKDTDCWTCPGGEGFMIRGKNYLKDNSKVVGGDPLLKLIAVDWLKVDKAADRIALHHRNLVQSEAGKSLPFILVFNLQVPAKPNYSLVLYYASDRPVKKDSLLAKFLDGDDAFRDTRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFKQDNFFEIDVDIGSSSVARSVIGLVLGYVTSLVVDLAILIEAKEESELPEYLLGTVRLNRLKPESAEPLED* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0390 733 CDD START 204 389 - -
Vra5g0390 733 SUPERFAMILY Bet v1-like 197 368 - -
Vra5g0390 733 SMART PH_update 20 130 IPR001849 -
Vra5g0390 733 ProSiteProfiles START domain profile. 205 364 IPR002913 GO:0008289
Vra5g0390 733 PANTHER PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN 9 732 - -
Vra5g0390 733 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 518 723 IPR009769 -
Vra5g0390 733 Pfam START domain 226 344 IPR002913 GO:0008289
Vra5g0390 733 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 9 732 IPR045096 -
Vra5g0390 733 Gene3D - 199 388 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0390 Vra-Chr5 4051765 4067822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0390 - - gmx:100786048 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2347 7 43566489 43579913 Vra5g0390 5 4051765 4067822 PCT