Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0376 ATGACCCATTGGAGTACTGATAGCCAGGTAGAAAAAGGAGATAAATTGGGGATGGAAGTTGGCAAAAGGAGGGTAGGAGCTAGAGGGAGTGTGGTTGCAGGGTCAGTGTGGGAGAGCAGAATGAAGAGTGATGAAGTGAGAGGTGGGATCAAGGTGTTTAACGCAGAAGAAAATGCTGAAGAAAATGGTGGCGGTGCCAGATTGAAAAAAAGCCCAATTGGGTGTGGAAAGAGAAAAACTTGGAAATCTGAGAGTTCTGAGGGGTCAGATAATAGGATCTCAATTCAGGTGGCAAGAGGGAAGACAGAGACCCTGAAGAGTTCTGAGGAGCTGAGCATTTCTTCCTCTGATGGAATAAAGAAGAGTCCAACACAAACCAGAAAGATTGCTTCTTTTGCAAATAAACTTGAGAGAAGCCCAATTTACCCCAGAAGGAGGAGATCTGAGACACAGAAGGGCGGTGAATCTGACGAGGGGCATGAGAGGAGTTCAGCACAATTGAGGAAGAGCAAGTCAGATCCAATAAAGAAGATTGCTTCTCCTGGTGTTAGTTCAATTCAATTGAGGAACACGAAATCCGAGTTGGATTTAGTTCCTGATGAACCAATGGATGAAAAAATTGAGGTTGAGAATGAGAAGAATGATGCTGACTATAATAATTGCATGGATTTGGATGATGTGTGCCAAGAGAAGGTCATATCTAGCAGCTCAGCGAATGCTGTTCAATGTTCAACAGAATTATCGGTTCAGGTTGGTAATGATTTAGATGAAGTTGCAGTTGATGAAGCAGATGAAGGAGATGAGGAAGGGGAAGAAATTGAGATTGAGATGGAGAAGAGAATTGATGTGAAGGAAATTAGTATAGCAGAAACTCTGGTTGTCAAGGAGCCAGAAAAAGATGAGACTGTTGGGAAAGAACAGGACAAAAAGGTTATTGTGAATGAACCAGAAAAGAAGGAGGTTCTAAATGAATCAGAACCAAAGAAGATTATGAAGGAACCAGAACCTAAGAAGATTCTAAATGAACCAGAACCTAAGAGGATCGTGAGTGCCCACATGCGATTTCATCACAAAAATGAAAGAAAGTCAGTTTCTGTTCCTCTTAGTCTGAAGCAATCTCCTACAATTAAAAGGAATTCAACAATTAACCGAAATTTCGCCCAAGCTAATTCTATTCCAAAGGCCGAAGAATACGGCAGCTTTCCACAAACCCAAAGCAAATTGCAGAGTATAGTGGATTTAATCATGTGGAGAGACATTTCAAGATCAGCATTTGTTTTTGGAATTGGGACATTCATCATAGTCTCATCTTCTTATGCAAAGGATATCAATCTGAGTCTTATTTCAGTTACGTCTTATATAAGTCTTGTTTATCTGGCTGTCATCTTCCTATATAGATCCCTAATATTCAGGGGTTTCATAGAAGTTGAAAATACAAATTATGTATTGGGAGAAGAAGATGCAATTTGGATGCTAAAATTGATCCTTCCTTACTTGAACGAGTTCCTGTCAAAACTCAAGGGCTTGTTTTCTGGAGATCCGGGTACCACCATAAAGTTGGCTGTTTTGCTCTTCGTCTTAGCGAGATGTGGCAGCTACATAACCATTTGGAAGATGATCAAATTGGGCTTCTTCGGAGTTTTTACTGTGCCAAAGATATGCACATCTTATTCTGCACAGTTAACTGCATATGGAAATTTTTGGATTCGGCGATTCCGAGATGCTTGGGATTCATGCACACACAAAAAAGCAGTGGCTCTTGGCATCTTTGGGCTTGTGTGGAATTTATCGTCAGTTGTTGCTCGAATTTGGGCAGTGTTCGTGCTATTTGTGGCCTTTAGATATTATCAACAGCATTATTTGGTGAGAGATGAATTTGGGGAAGATGAAGGAGGATGTGATGAAACATGGGAAGAACCTCTTGGAGTTAGACACAAACAAGGACATGCAACCAACCTTAGTGATACCAATAAACTAAAGAAAGTTTTCTGA 1992 0.4066 MTHWSTDSQVEKGDKLGMEVGKRRVGARGSVVAGSVWESRMKSDEVRGGIKVFNAEENAEENGGGARLKKSPIGCGKRKTWKSESSEGSDNRISIQVARGKTETLKSSEELSISSSDGIKKSPTQTRKIASFANKLERSPIYPRRRRSETQKGGESDEGHERSSAQLRKSKSDPIKKIASPGVSSIQLRNTKSELDLVPDEPMDEKIEVENEKNDADYNNCMDLDDVCQEKVISSSSANAVQCSTELSVQVGNDLDEVAVDEADEGDEEGEEIEIEMEKRIDVKEISIAETLVVKEPEKDETVGKEQDKKVIVNEPEKKEVLNESEPKKIMKEPEPKKILNEPEPKRIVSAHMRFHHKNERKSVSVPLSLKQSPTIKRNSTINRNFAQANSIPKAEEYGSFPQTQSKLQSIVDLIMWRDISRSAFVFGIGTFIIVSSSYAKDINLSLISVTSYISLVYLAVIFLYRSLIFRGFIEVENTNYVLGEEDAIWMLKLILPYLNEFLSKLKGLFSGDPGTTIKLAVLLFVLARCGSYITIWKMIKLGFFGVFTVPKICTSYSAQLTAYGNFWIRRFRDAWDSCTHKKAVALGIFGLVWNLSSVVARIWAVFVLFVAFRYYQQHYLVRDEFGEDEGGCDETWEEPLGVRHKQGHATNLSDTNKLKKVF* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0376 663 PANTHER RETICULON-LIKE PROTEIN B21 18 662 - -
Vra5g0376 663 MobiDBLite consensus disorder prediction 139 175 - -
Vra5g0376 663 MobiDBLite consensus disorder prediction 87 132 - -
Vra5g0376 663 Pfam Reticulon 412 564 IPR003388 -
Vra5g0376 663 MobiDBLite consensus disorder prediction 1 21 - -
Vra5g0376 663 ProSiteProfiles Reticulon domain profile. 411 564 IPR003388 -
Vra5g0376 663 PANTHER RETICULON-LIKE PROTEIN B17 18 662 IPR044647 -
Vra5g0376 663 MobiDBLite consensus disorder prediction 58 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0376 Vra-Chr5 3871485 3875747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0376 K20720 - gmx:100801188 876.315