Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0350 ATGAAGACAATAAAAGATTCGCGCCTAGGCATGGGCGATGTGCAGATCCTGCCTGGGTCTCGTCATCGTCCTCCTATGAAGAAGCCAATGTGGATTATTGTCTTGGTTTTATTCGTATGCGTGTTTCTAATATGTGCTTATACCTACCCACCAAAAAGCAGTTCTGCTTGCTACATCTTTTCTTCTGAAAATTGCCGGTCAATTACTGATTGGCTTCCACCAGCTCCTGCAAGGGAATACACAGATGAAGAGATTGCATCACGAGCTGTTGTTAGGGATATTTTGAAAACACCTGTAGTTCTTTCAAAGAATCCGAAAATCGCCTTCATGTTTCTGTCACCTGGTTCTCTACCATTTGAAAGATTATGGGATAAATTTTTTCAAGGACATGAAGGGAAATTCTCAGTATATGTGCATGCTTCTAAGACTAAACCAATTCACGTGAGCCGTTATTTTGTTGACCGGGATATACGAAGTGCTCAGGTGGTGTGGGGTAAAATATCTATGGTTAATGCAGAACGACGACTACTGGCAAATGCTTTACAAGATCCTGATAACCAGCAATTTGTTTTACTTTCTGATAGCTGTGTGCCATTGTATACCTTTGACTATATTTTTGATTATCTGATGTACACAAACGTCAGCTTTGTTGATTGCTTTATGGATCCTGGTCCTCATGGCAATGGCAGGTATTCAAAACGCATGTTACCCGAAATTGAGATGAAGAACTTTAGAAAGGGTGCACAGTGGTTTTCAATGAAGCGCCAGCATGCTGTAATAGTTATGGCTGATAACCTGTATTACTCAAAATTTAAGGCTTACTGTCAGCCTGGTTTTGAAGGGAAAAATTGCATTGCGGATGAGCATTACTTACCTACATTCTTCCAGATTGTTGATCCTGGTGGAATTGCAAATTGGTCAACAACTCATGTTGACTGGTCTGAGAGAAAGTGGCATCCGAAATCATATAGGGTTCGAGATATTTCATATGAGCTTTTGAAGAATATTACGTCCATTGATGTTAGTGTGCATGTCTCGAGTGATGAGAAGGGTAGTAGCAGCTGTAAATTACATCAATTTTATCTACACTGA 1092 0.402 MKTIKDSRLGMGDVQILPGSRHRPPMKKPMWIIVLVLFVCVFLICAYTYPPKSSSACYIFSSENCRSITDWLPPAPAREYTDEEIASRAVVRDILKTPVVLSKNPKIAFMFLSPGSLPFERLWDKFFQGHEGKFSVYVHASKTKPIHVSRYFVDRDIRSAQVVWGKISMVNAERRLLANALQDPDNQQFVLLSDSCVPLYTFDYIFDYLMYTNVSFVDCFMDPGPHGNGRYSKRMLPEIEMKNFRKGAQWFSMKRQHAVIVMADNLYYSKFKAYCQPGFEGKNCIADEHYLPTFFQIVDPGGIANWSTTHVDWSERKWHPKSYRVRDISYELLKNITSIDVSVHVSSDEKGSSSCKLHQFYLH* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0350 363 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 354 IPR044174 GO:0016757
Vra5g0350 363 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 354 - -
Vra5g0350 363 Pfam Core-2/I-Branching enzyme 107 336 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0350 Vra-Chr5 3451072 3457652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0350 - - gmx:100817202 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0350 5 3451072 3457652 Vra5g0350 5 3451072 3457652 ECH