Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0344 ATGGATTCGGACACTGATTCACCAAAATCCAAAACTCCCAGAAAGGAGAAGAACAAGAAAAACAAGAAGAAAAAAGATGTCCCCCCTCAACCTGATCGAATTGAGGTTGCGGTGGAGGTTGTCCGCGAGCACCCCAATAAAACAGCTCCTGTTGTTGGTTATTTTCCTTCGGGTTTTGATCCGGTTAAGAATCATGCCAGTGGTTCTGGTCCCTCTGAATTTCAACTTTACAGGCACAGGAACATGTCCAAGAGGATGCAGCTTGTTGTTCGCCCTCCTGGAACTTCGGTGGAATTTGTTGGAACTAGTTTTTCTGGAGAGGCTGCGGCTGGACACCGGACCATGTTCGCGCTCGGACTCCTTGATAAGGAAGCTGGGACCCTGAAGATTGTTCCCATTGCTGGTAATAAGATATTCAGATTGGAGCCAAAGGTTAAAGGTGTGGACGCTGCTGACAATGAGCCTGCCAGCTCAACATTGGAAGAGATGACTCCACAGCAGAAGTTTGCAGAGACTACTGCTATATTGGGGACAAAGAAGGATATAGAGAAGGCTAAAAAGAAGCTAGCTCTCAAACAAGATGAAGATCCTAATTCTCAAAGGAATCTGAATTTGAAAATGAAAAATGTTTCTGTAAAAGAAAGCGCTCTTCAAAGTACAGAATCTCATGTTTCTCGCAACATACCACCATATGATACTTCTGCAACTACACCTCAGGAGGCATATGTATTGGACAAAATCATCCTTACAGGAGAATGGAATTATCTTGAAGACATTTATTATAATTTGCATCAGGAAGAAAAAGCGGACTTCAGTTCTTATCCAACATTTGTTCGCAACAGGGTAGAGGGGTTAAGGAAAATTAAGGATGAGTCAGAAAAGAGGAAGCTTTCCTGCATATTCTCATACATCAATCATCTGATAAAGTTCAAAGATCAGCATTCCTTTGGTGTTTTCTCCGCAAAGGGCCATAAAATCCCCAACATCCTGAGATATAAATTTTCAAATATGTTTGCTGTTTCTGAACTAAGAAGGCTACCCCCTGAAAAAATTTCTCTTCTCATAAGTTATGTGCTGGTGCTTACGCTTTTCGCTGATAACTTCCAAACTGACTGCACAGATATTGCAAAGGATCTGAGCATGAGTGTTTTGGCCGTGAGAAAAGTCTATGAGGAATTGGGTTGCAAATTAATCCGTCAGAAAGGCACTCTTAACAGTTTGTCTTTTACGCTTTCTGTCCCTCTTACATTTCCTGATTTAAAGAATAAAGGAAAGAGGAAGAGGTAG 1287 0.4172 MDSDTDSPKSKTPRKEKNKKNKKKKDVPPQPDRIEVAVEVVREHPNKTAPVVGYFPSGFDPVKNHASGSGPSEFQLYRHRNMSKRMQLVVRPPGTSVEFVGTSFSGEAAAGHRTMFALGLLDKEAGTLKIVPIAGNKIFRLEPKVKGVDAADNEPASSTLEEMTPQQKFAETTAILGTKKDIEKAKKKLALKQDEDPNSQRNLNLKMKNVSVKESALQSTESHVSRNIPPYDTSATTPQEAYVLDKIILTGEWNYLEDIYYNLHQEEKADFSSYPTFVRNRVEGLRKIKDESEKRKLSCIFSYINHLIKFKDQHSFGVFSAKGHKIPNILRYKFSNMFAVSELRRLPPEKISLLISYVLVLTLFADNFQTDCTDIAKDLSMSVLAVRKVYEELGCKLIRQKGTLNSLSFTLSVPLTFPDLKNKGKRKR* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0344 428 MobiDBLite consensus disorder prediction 1 33 - -
Vra5g0344 428 Coils Coil 175 195 - -
Vra5g0344 428 Pfam A49-like RNA polymerase I associated factor 73 418 IPR009668 GO:0003677|GO:0006351
Vra5g0344 428 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 16 427 IPR009668 GO:0003677|GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0344 K03005 - gmx:100812427 611.683