Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0337 ATGGAACACTCAACAAAATTCTTCTGGGTGTTGGTGTTGTGCATGGTTGCAATGGCACACCAGGCAACGGCACTCGAAACACTGAAAGGAAAGAATCTAATCCAAAAGGTATGCACACTCTCTGCAACAAGAAACCTGTGTGTTCAGGTTCTCTCTTCAGACCCTCTCAGAAGCCCTAACGCAGACCTCAAAGACTTGGCAATCATTTCTCTCAGAGTTGCTGCCACCAACGCTTCTGGGATCCTCGGCGAAACCAAAATGCTCATCGACGACGATAGCCTCAGCCCCGATGTCCAACAAGGTTTGGCCGATTGCAAGGAGACCATTCTCGACGCAGAGAGCCAGTTGGAGGACACCATTGCCGCTCTCTTGATTGATGCCAAAACTGATACTCAGATTTGGCTCAAAGCTGCCTTGGCCGCAATCGACACCTGCGACGCCTCCATCCCCGGCGACGACGACATTCTCTCCGTTCAGAGCGTCCTCTTCCGCAAGCTCTGCAACATTGCCATCACCATCAGCAGGCTCCTTCTTCATCCCGTCAAACTCTAA 552 0.5145 MEHSTKFFWVLVLCMVAMAHQATALETLKGKNLIQKVCTLSATRNLCVQVLSSDPLRSPNADLKDLAIISLRVAATNASGILGETKMLIDDDSLSPDVQQGLADCKETILDAESQLEDTIAALLIDAKTDTQIWLKAALAAIDTCDASIPGDDDILSVQSVLFRKLCNIAITISRLLLHPVKL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0337 183 Pfam Plant invertase/pectin methylesterase inhibitor 32 172 IPR006501 GO:0004857
Vra5g0337 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 178 IPR035513 -
Vra5g0337 183 SMART PMEI_2 29 173 IPR006501 GO:0004857
Vra5g0337 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 176 IPR006501 GO:0004857
Vra5g0337 183 PANTHER PECTINESTERASE 1 178 - -
Vra5g0337 183 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 178 - -
Vra5g0337 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 178 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0337 Vra-Chr5 3323000 3323708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0337 - - vun:114164758 290.041