Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0333 ATGGATTCAGAAAACTGGAGACCCTCTCTGCTCTACCTCGCCTTCCTCCTTGCAATTCTTCACCTCACGCAAAACTTCCTACCACACTTCTTCCTTGGCAACGAAACGGTTCGCATCAAGAAGAACCCCAATCTTCCCCTCCGGTTCGCTTCTGACGGTACCTTCAAGATCCTCCAGGTGGCTGATATGCACTTTGGCAGTGGAGGCCTAACCCGTTGCAGGGACGTGCTGCCTTCTGAGTTCGAGTTTTGTTCAGATCTTAACACCACTCGGTTTTTGAAGCGAATCATTCAGGCAGAGAATCCGGATTTTATTGCCTTTACTGGAGATAATATTTTCGGATCGAGTGCACCTGATGCCGCAGAATCTCTGTTTAGAGCCTTTGGTCCTGTTATGGAATCAGGACTTCCTTGGGCAGCAGTTTTGGGAAACCATGACCAAGAATCAACTATGAATCGTGAAGAGTTAATGTCCTTAATTTCCCTTATGGATTATTCAGTTTCACAAATCAACCCATCAGATGATGATCCAACTAAAGGTGGCTTGATAACTACTAAAATCGACGGATTTGGGAATTATGACCTAAGAGTGTATGGTGCCCCAGGGTCCATGTTGGCAAACAGCACTGTTTTGAATCTTTTCTTTCTTGACAGTGGAGACAGGGCTGTTTATCAGGGAATTCGAACTTATGGATGGATCAAGGAGTCTCAACTTCACTGGCTTCGTCGTGTTTCTCAAGAATTCCAGGGACAAAATGAGGATTCTCTTCATTCTGCTGATGGTATTTCCACAATTAAACCCCCCGCACTTGCATTTTTCCACATCCCTATTCCAGAAATTCCGCAACTGTTCTACAAAGAGATTGTAGGCCAGTTTCAGGAGGGTGTGGCGTGTTCAAGAGTGAATTCGGGGGTCTTGCAGACCTTTGTCTCCATGGGAGATGTGAAGGCTGTGTTCATAGGCCATGACCACACCAATGACTTTTGTGGAAACTTGGATGGCATCTGGTTTTGTTATGGTGGTGGCTTTGGATACCATGGCTATGGGAAAGCAGGGTGGCCCAGAAGAGCGAGGATCATACAGGCTGAACTTGAGAAGGGAAAGAATTCCTGGATGGGCGTGCAGAGAATCTTGACTTGGAAACGCCTTGATGATGAGAAGCTGAGCAAGATTGATGAACAAATCCTATGGCAGGTTAGATGA 1203 0.4605 MDSENWRPSLLYLAFLLAILHLTQNFLPHFFLGNETVRIKKNPNLPLRFASDGTFKILQVADMHFGSGGLTRCRDVLPSEFEFCSDLNTTRFLKRIIQAENPDFIAFTGDNIFGSSAPDAAESLFRAFGPVMESGLPWAAVLGNHDQESTMNREELMSLISLMDYSVSQINPSDDDPTKGGLITTKIDGFGNYDLRVYGAPGSMLANSTVLNLFFLDSGDRAVYQGIRTYGWIKESQLHWLRRVSQEFQGQNEDSLHSADGISTIKPPALAFFHIPIPEIPQLFYKEIVGQFQEGVACSRVNSGVLQTFVSMGDVKAVFIGHDHTNDFCGNLDGIWFCYGGGFGYHGYGKAGWPRRARIIQAELEKGKNSWMGVQRILTWKRLDDEKLSKIDEQILWQVR* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0333 400 PIRSF Ptase_At2g46880 3 397 IPR011230 -
Vra5g0333 400 PANTHER - 3 398 - -
Vra5g0333 400 SUPERFAMILY Metallo-dependent phosphatases 54 375 IPR029052 -
Vra5g0333 400 Pfam Calcineurin-like phosphoesterase 55 325 IPR004843 GO:0016787
Vra5g0333 400 Gene3D - 53 370 IPR029052 -
Vra5g0333 400 CDD MPP_Dcr2 53 338 - -
Vra5g0333 400 PANTHER INACTIVE PURPLE ACID PHOSPHATASE 28-RELATED 3 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0333 Vra-Chr5 3252271 3259203 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0333 - - gmx:100818515 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0333 5 3252271 3259203 Vra5g0333 5 3252271 3259203 ECH