Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0319 ATGATGGCTCAGGCTGTAGTGAGCTTCATAGTGCAAAGTCTTGGTGATTTGCTGATTCGAGAAGCAGTATTCCTATATGGGGTGGAAGACCAAGTGTTGCAGCTGCAAACTGAATTGAGGATGATGCGGTCTTACTTGCAAGATGCAGACAGAAGGCAAGATGAAAACGAAAGCCTAAGGAGTTGGATTTCAGAAATCAGAGAAGCAGCTTATGATTCTGATGATGTCATTGAGTCATATGCCCTCAGAGAGGCCTCAAGAAGAAATTTGCCAGGTGTGTGGAACCTAATCAAAAGGTATGCTTCAATCATCAACCGGTTTATAGAAATCCACATGGTGGGATCTCGTGTTGATAATGTCAAAGCCAGGATTTCTAGCCTCACAAGGAGTCTTAAAACCTATGGCATAAAACCTGAGAAAGAAGAGCCCTCAAATTCTATGCATGGGAGACAGATTTTGAGGAGGTCTTATTCACATGTCATTGAAGAGGACATAATTGGTGTTGACGATGATGTCAAGAAGTTGGAGTCATATTTGGTGGATCCCAGCAAAAGAGTGGTGGCCATTTGTGGGATGGGAGGATTGGGGAAGACAACATTGGCAAAGAAGGTGTACCATAGTGTTGATGTGAGGAACAGTTTTAAGAGCTGGGCTTGGGCTTACATATCACAGCACTGCCAAGCAAGGGATGTGTGGATAGGAATTTTATTTAGGCTGATCTCTCCTTCACAGGAGCAAAGACAGGAAATTGACAATATGAGAGATGAAGAGCTTGCAAAGATGCTTTACCAAGTTCAAATGGAGAAGAGTTGCTTAGTGGTCCTTGATGATATTTGGAATGCAGAAACATGGAACAAACTGAAGCCTGCCTTCCCTCATGGAACATCAGTATCAGCAGTTGGTAGCAAAATATTGCTAACTTCTCGAAACATTGATGTTGCATTCCAAATGGACCCTAGTTGTTATCTTCACACACCAAAATGTTTGAATGAAGTTGATAGCTGGGAGTTGTTCCAAAAGAAGTCATTTCTTAAAATTGATGATCCAGACTACAGAGAGAAGGAGAAATTGGGAAGGGAAATGGTTGGAAGATGTGGAGGTTTACCATTGGCCATCATTGTTCTTGGAGGACTGTTAGCATCAAAGCCTACATTCTATGAATGGAACACTGTGTGCCAGAACATCAACTCATATTTGAGGAGAGCAAACGGCCAAGAACAATGCTTAGGAGAGGTGTTGGCTTTGAGCTATTACGAATTACCATACCTGTTGAAGCCATGTTTCCTACACTTGGCTCATTTCCCAGAAAACTTAGAGATACCAACAAAGAAACTAATTAGAATATGGGTGGCAGAGGGTATTATATCTTTGGCTCACAGTGAAGGAGAAGGTGAAGAAGCTCTTGAGGATGTGGCACAACGTTACCTGACTGAGCTAGTGGAGAGGTGCATGATTCAAGTAGTTGAAAAGAGTTCATCAGGAAGAATTAGAAGTTGCCAGATGCACAACCTCATGAGGGAACTTTGTGTTGACAGGGCATATTTGGAAAACTTTCTTCTGGAGATCAATTCCCGGAATGTAGATGAATCTAGAGGGACATCAAGAGCAAGGTCAGTGGGAAAAGTTCGCAGGATTGCCTTGTTTTTGGATCAAGATGTTGATAGGTTCTTCCTTTCACAACTGAAAAGCCACCACCATTTAAGGTCTCTTCTTTGCTTCCATGAAAAGACAGCTAGAATCAGTGAATGGGGCTTGATGAAGTCATTTTTCGAAAAATGTAGGTTACTCAGAGTCCTGAACTTGGAAGGAATGCAGGGTCTGGGAGGAAAGTTGCCAAAAGAAATTGGCTATTTGATCCACCTAAGGTTTCTCAGTCTGAGAAATACCAAAATTGATGAGTTGCCAACATCAATAGGTAATTTAAAATGCTTGATGACCCTGGATCTTCTAACGGGGAATTCAACTGTGCAAATACCAAATGTCATAGGTAACATGCAAAAAATGAGACATTTATATCTGCCAGAGTCTTGTGGTAATGGCATTGAAAGGTGGCAACTGGACAACCTGAAAAACTTGCAGACGCTGATTAACTTCCCTGCAGAAAAGTGTCATGTAACAGATCTCATGAAATTAACCAATTTGAGAAAATTAGTGATTGATGATCCTAACTTTGGAGGTATCTTTAGGTATCCTGATGTGCAATTTAGGCACCTAGAGTCATTGTTTTTTGTTAGTTATGAAGATATATCAGTTGTCGATGTTGCATTAGGATGTCCCAATCTTTACAAACTTCACATAGAAGGACCTATAAAGAATTTTCCTGAACCCCACCAACTTTCTTCCAAGCTTCTGAAGCTAAAGTTGACGGGTTCTGGACTTCTTGCAGATCCAATGCCAACATTAGAAAAGCTTCCAAATTTAAGGTTGCTTGAGCTACAACTTGATTCATTTGTAGGCAAGCAACTGCATTGTTCCAGCAAAGGCTTTGCTCAACTCAAGTCTCTGGTTATCCATGATTTGTTCAATCTTGAGGAGTGGAGGTTGGATAAAGGAGCCATGCCTTGTCTTAGAGAACTTAAGATTGAAAATTGCACCAAGCTTGAGAAGGTTCCAGATGGGCTCAGATTTCTTACCACTCTTCAGCATCTGGAGATCAGATCAATGTTTGCAGCATTCAGAACCAAACTTGAAAAAGGAGGAGAGGATCACTACAAAATCCAACATGTGTCAGCTGTGGTTTTTTGTTACTGTGACTATTAG 2760 0.412 MMAQAVVSFIVQSLGDLLIREAVFLYGVEDQVLQLQTELRMMRSYLQDADRRQDENESLRSWISEIREAAYDSDDVIESYALREASRRNLPGVWNLIKRYASIINRFIEIHMVGSRVDNVKARISSLTRSLKTYGIKPEKEEPSNSMHGRQILRRSYSHVIEEDIIGVDDDVKKLESYLVDPSKRVVAICGMGGLGKTTLAKKVYHSVDVRNSFKSWAWAYISQHCQARDVWIGILFRLISPSQEQRQEIDNMRDEELAKMLYQVQMEKSCLVVLDDIWNAETWNKLKPAFPHGTSVSAVGSKILLTSRNIDVAFQMDPSCYLHTPKCLNEVDSWELFQKKSFLKIDDPDYREKEKLGREMVGRCGGLPLAIIVLGGLLASKPTFYEWNTVCQNINSYLRRANGQEQCLGEVLALSYYELPYLLKPCFLHLAHFPENLEIPTKKLIRIWVAEGIISLAHSEGEGEEALEDVAQRYLTELVERCMIQVVEKSSSGRIRSCQMHNLMRELCVDRAYLENFLLEINSRNVDESRGTSRARSVGKVRRIALFLDQDVDRFFLSQLKSHHHLRSLLCFHEKTARISEWGLMKSFFEKCRLLRVLNLEGMQGLGGKLPKEIGYLIHLRFLSLRNTKIDELPTSIGNLKCLMTLDLLTGNSTVQIPNVIGNMQKMRHLYLPESCGNGIERWQLDNLKNLQTLINFPAEKCHVTDLMKLTNLRKLVIDDPNFGGIFRYPDVQFRHLESLFFVSYEDISVVDVALGCPNLYKLHIEGPIKNFPEPHQLSSKLLKLKLTGSGLLADPMPTLEKLPNLRLLELQLDSFVGKQLHCSSKGFAQLKSLVIHDLFNLEEWRLDKGAMPCLRELKIENCTKLEKVPDGLRFLTTLQHLEIRSMFAAFRTKLEKGGEDHYKIQHVSAVVFCYCDY* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0319 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 431 IPR027417 -
Vra5g0319 919 PRINTS Disease resistance protein signature 186 201 - -
Vra5g0319 919 PRINTS Disease resistance protein signature 265 279 - -
Vra5g0319 919 PRINTS Disease resistance protein signature 365 379 - -
Vra5g0319 919 PRINTS Disease resistance protein signature 802 818 - -
Vra5g0319 919 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 3 888 - -
Vra5g0319 919 Gene3D - 6 113 - -
Vra5g0319 919 Gene3D - 147 322 IPR027417 -
Vra5g0319 919 SUPERFAMILY L domain-like 543 887 - -
Vra5g0319 919 Pfam NB-ARC domain 170 417 IPR002182 GO:0043531
Vra5g0319 919 Gene3D - 328 415 IPR042197 -
Vra5g0319 919 Pfam Rx N-terminal domain 6 88 IPR041118 -
Vra5g0319 919 Gene3D Ribonuclease Inhibitor 533 905 IPR032675 -
Vra5g0319 919 PANTHER DISEASE RESISTANCE PROTEIN RP 3 888 IPR044974 GO:0006952
Vra5g0319 919 Gene3D - 416 513 IPR036388 -
Vra5g0319 919 CDD RX-CC_like 3 129 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0319 Vra-Chr5 3059181 3062909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0319 576 887 Receptor kinase-like Gene Family AT4G13820 27.679 4.37e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0319 - - gmx:100305356 1462.2