Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0306 ATGGCGGAGAAACCCCAACCGGTTCGGGTGCTGTACTGTGGGGTGTGCAGTTTGCCTCCCGAATACTGCGAATTTGGATCCGATTTCGAAAAATGCAAACCCTGGTTAATCCAAAACGTCCCTGACCTATACCCTAATCTTCTTAAAGAGGCAAATGATAAGGGAGCTGATACAGTTGCTGATAAGCTGCAAAGTACCGGTATATCGTCAGGAGCTGGTGATGGAGCTGCTTCCTCAGCACCGAAGCAAGAAGAAGTGAAGCGTCTTCCGGGTGGGAAGATAAAGAAGAAGGATAAGCAAGAGGTGGTTATTGAAAAGGTTGTTCGTAACAAGCGAAAGTGTATCACCACTGTGAAGGGCCTGGAGCTTTTCGGTGTCAAGCTCAGCGATGCTTCCAAGAAACTCGGGAAAAAGTTTGCTACAGGAGCCTCTGTTGTCAAGGGACCAACTGAGAAAGAACAAATTGATGTTCAAGGGGATATAGCTTATGACATCGTGGAATTCATTACAGATACGTGGCCTGATGTTCCAGAAACAGCAATTTTCTTTATAGAAGATGGGAGAAAGGTTCCAGCTGCTTGA 582 0.4622 MAEKPQPVRVLYCGVCSLPPEYCEFGSDFEKCKPWLIQNVPDLYPNLLKEANDKGADTVADKLQSTGISSGAGDGAASSAPKQEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITDTWPDVPETAIFFIEDGRKVPAA* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0306 193 CDD DENR_C 100 185 IPR046447 -
Vra5g0306 193 ProSiteProfiles Translation initiation factor SUI1 family profile. 102 173 IPR001950 GO:0003743|GO:0006413
Vra5g0306 193 PANTHER TRANSLATION MACHINERY-ASSOCIATED PROTEIN 22 1 193 - -
Vra5g0306 193 MobiDBLite consensus disorder prediction 65 91 - -
Vra5g0306 193 Pfam Translation initiation factor SUI1 99 172 IPR001950 GO:0003743|GO:0006413
Vra5g0306 193 PANTHER DENSITY-REGULATED PROTEIN HOMOLOG 1 193 - -
Vra5g0306 193 SUPERFAMILY eIF1-like 19 183 IPR036877 GO:0003743|GO:0006413
Vra5g0306 193 Gene3D - 60 179 - -
Vra5g0306 193 TIGRFAM DRP1: density-regulated protein DRP1 7 181 IPR005873 GO:0003743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0306 K24272 - gmx:100306708 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0306 5 2912185 2915410 Vra5g0306 5 2912185 2915410 ECH