Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0299 ATGGCTGCATCGGTAAAGAACAACTTCCTGAACCATGCACTGGCTTCCAATCTCCAACAAGCACTGATCCGCAGGAAGGACAGTGTGCAGGAACAGCACCACAGCAAAGCCAAGGAACCAACCAAAGCTTCTTCAAAGCCTGTGGTACTAGTCACCAATGGTGAAGGCATAGACTCTCCTGGTCTAACATTCCTCGTGGAGGCACTCCTCCGTGATGCTCTTCTTGATGTTCATGTCTGCGCCCCACAATCGGATAGATCTCTGTGTGGTCACTCGGTTACCACTGGGGAGACAATAGCTGTGTGTTCAACACAAGTTGGTGGTGCCAATGCCTTTGAAGTGTCAGGAACCCCAGCAGACTGTGTCTCTTTGGCTTTATCCGGGGCATTGTTTTCTTGTTCAAAACCTGTTTTGGTAATTAGTGGAGTAAACAAAGGAGCAACCTGTGGTTATGGCACGTTGTACTCAGGGGCTGTTGCTGGAGCTAGAGAGGCTGTGATTTGTGGTGTGCCTTCTCTCTGTATATCATTGAACTGGGAAAAGAATGTGAGTTGTGAAAATGATTTGAAGGATGCAGTTACTGTATGCTTACCATTAATTCACGCAGCCATACGTGATATTCAGAAAGGGATTTTCCCCAAGAATTGCTTCCTCAATATAGCAATCCCAAGCTGTCCTCTGACAAATAAGGGTGTCAAAGTGACAAGGCAAAGTCCAAACAGAGCTTCTTTAAATTGGCAAGCAGTGTCAACAAATAGGAACCCTTCTGCAGGCCATTACATGTCAAACCAGCAAAGTCTTGGAATCATGTTAGCAAAACTAGGACGAGATGCCTCTGCTGCTGCAGCAGCACGCCGGCTAAACTCAAACCGCAAGAACGTGGAGATTGAATCAATTGGTGTTGCTGGGAAATTCAGTTCTCAACAAAGCATAAAGAAATACTTCAGAATGGAGTTAACAGAAAAAAGGCAGGAGAATGAAGAGGATGATTTAGACTCTAGAGCACTTGAAGAGGGATTTGTTACTGTCACCCCTTTGTCTGTATATGAAAATGGTGACATGGAAATTCAATCATCAGTCTCCAGTTGGTTGGCTATTGGAGTCAGTGGAGATGGTGTTAATTGA 1125 0.4516 MAASVKNNFLNHALASNLQQALIRRKDSVQEQHHSKAKEPTKASSKPVVLVTNGEGIDSPGLTFLVEALLRDALLDVHVCAPQSDRSLCGHSVTTGETIAVCSTQVGGANAFEVSGTPADCVSLALSGALFSCSKPVLVISGVNKGATCGYGTLYSGAVAGAREAVICGVPSLCISLNWEKNVSCENDLKDAVTVCLPLIHAAIRDIQKGIFPKNCFLNIAIPSCPLTNKGVKVTRQSPNRASLNWQAVSTNRNPSAGHYMSNQQSLGIMLAKLGRDASAAAAARRLNSNRKNVEIESIGVAGKFSSQQSIKKYFRMELTEKRQENEEDDLDSRALEEGFVTVTPLSVYENGDMEIQSSVSSWLAIGVSGDGVN* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0299 374 MobiDBLite consensus disorder prediction 26 41 - -
Vra5g0299 374 MobiDBLite consensus disorder prediction 25 45 - -
Vra5g0299 374 SUPERFAMILY SurE-like 48 350 IPR036523 GO:0016787
Vra5g0299 374 Gene3D - 37 363 IPR036523 GO:0016787
Vra5g0299 374 Pfam Survival protein SurE 49 241 IPR002828 GO:0016787
Vra5g0299 374 PANTHER 5'-NUCLEOTIDASE SURE-LIKE 1 370 - -
Vra5g0299 374 PANTHER 5'-NUCLEOTIDASE SURE 1 370 IPR030048 GO:0008252
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0299 Vra-Chr5 2829244 2831912 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0299 K03787 - gmx:100785738 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0299 5 2829244 2831912 Vra5g0299 5 2829244 2831912 ECH