Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0297 ATGGGATTATCACTTTCATTACTCTCATCAGCCTGGGAAGAAATCGTTAGACATTCTCTCTTTGGTCTGTCTTTGAATTTGACCTTCGGTTCAAAAGATGGGGCTGTGATTTTGAGATCAGGAGGTAGCTTCAAGAAAAGAGAATCAGACACCTCTTCTGTGTTGTCAAAGGGTGCCTCTACCACCAACGGCTCAAGCAAGTTGAAGGATTGCAGACCCGAACACATGATCTTTGAAAGAAACCTTTCATGCATCAAAGGAATGGAGATGATGGATTCTGAGAGAAGTGAACACTTGCAGCAGAAGCCAGTGCCTGTTCTTTCTCTGCCTAAAGAAGTGGTTTTCTCTTCCCCAAGACCAGTTAGTGAGCTTGATGCTGCCGCAACTAAAGTTCAGAAAGTCTACAAGAGTTACCGCACCAGAAGAAACCTTGCAGATTGTGCTGTTGTTGTGGAAGAGCTCTGGTGGAAGGCATTAGACTTTGCTGCTCTTAAAAGGAGTTCTGTTTCATTCTTTAATGTGGAGAAACAAGAAACAGCTATGTCAAAGTGGGCAAGAGCAAGGACAAGAGCTGCTAAGGTTGGAAAAGGTTTATCCAAGGATGAAAAGGCTCAAAAGTTGGCCCTGCAACATTGGCTCGAAGCTATTGACCCACGTCATCGTTACGGACATAATCTGCACATGTATTACGATATCTGGTTTGAAAGCCAAAGCACACAACCATTTTTCTACTGGTTGGATGTTGGAGATGGCAAAGAAATTAATCTTGAAAAATGTCCCAGAGCCGTCCTGCAACGCCAGTGCATTACATATCTTGGACCAAAAGAAAGGGAAGAATATGAAGTAATCGTGAAAGAAGGAAAGCTAGTGTACAGAGATGGAAGGTTTGTGGACACTGATGGAAAGTCGAAATGGATATTTGTTCTGAGCACCACAAGGTCCTTGTATGTGGGGCGCAAGCAGAAAGGTTCATTTCAACACTCCAGCTTTCTTTCTGGTGCTGCTACAACAGCTGCAGGCAGATTAGTGGCTAAGCAGGGTGTGCTTGAGGCTATTTGGCCATACAGTGGTCATTATCACCCCACAGAAGAGAACTTCAAGGAATTTATAAGCTTTCTTAACGAGCACAACGTGGACCTTTCGAATGTGAAGAAATGTGCTATAGATGATGACGCTCCTTCAATGGTTGGCTCCACTTCATTTAGTGACATTAAAGAGTCACAACAAATTAAGGGTCCCCCTCTACCTTCCATGAATGGCATCACCATAAATGCAACAACAATTCATAAAGAGACAGAAAAGAAGGTCGAGGTCCCAGTTTTTGACGTGTCTAAGAGGTTAACATGCAAGTGGTCTACAGGGGCAGGACCCAGGATCGGCTGTGTGCGTGACTACCCTGAACATCTTCAATCAATGGCCTTGGAGCAAGTCAACCTCTCCCCTAGACCTGCTTCTGCACGCCCATATAGCTACGGCCCAATCCCATCCCCAAGGCCCAGCCCAAAAGTTAGAATGTCTCCAAGGATTGCTTACATGGGCCTACCCAGCCCAAGGCGCCCTATCCCTGCCACAAGTTAA 1578 0.4518 MGLSLSLLSSAWEEIVRHSLFGLSLNLTFGSKDGAVILRSGGSFKKRESDTSSVLSKGASTTNGSSKLKDCRPEHMIFERNLSCIKGMEMMDSERSEHLQQKPVPVLSLPKEVVFSSPRPVSELDAAATKVQKVYKSYRTRRNLADCAVVVEELWWKALDFAALKRSSVSFFNVEKQETAMSKWARARTRAAKVGKGLSKDEKAQKLALQHWLEAIDPRHRYGHNLHMYYDIWFESQSTQPFFYWLDVGDGKEINLEKCPRAVLQRQCITYLGPKEREEYEVIVKEGKLVYRDGRFVDTDGKSKWIFVLSTTRSLYVGRKQKGSFQHSSFLSGAATTAAGRLVAKQGVLEAIWPYSGHYHPTEENFKEFISFLNEHNVDLSNVKKCAIDDDAPSMVGSTSFSDIKESQQIKGPPLPSMNGITINATTIHKETEKKVEVPVFDVSKRLTCKWSTGAGPRIGCVRDYPEHLQSMALEQVNLSPRPASARPYSYGPIPSPRPSPKVRMSPRIAYMGLPSPRRPIPATS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0297 525 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM5 1 523 - -
Vra5g0297 525 MobiDBLite consensus disorder prediction 399 418 - -
Vra5g0297 525 MobiDBLite consensus disorder prediction 46 68 - -
Vra5g0297 525 MobiDBLite consensus disorder prediction 484 505 - -
Vra5g0297 525 MobiDBLite consensus disorder prediction 53 67 - -
Vra5g0297 525 MobiDBLite consensus disorder prediction 488 502 - -
Vra5g0297 525 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 1 523 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0297 Vra-Chr5 2813107 2816746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0297 - - gmx:100784098 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0297 5 2813107 2816746 Vra5g0297 5 2813107 2816746 ECH