Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0296 ATGGACCTATCTACTCTCACAACACCCTTTGGCATAAATCCTTTTAGGATGTCCACAACTGTGAAGACAAGAAGAATGTGCTACATTCTAATGGCTTCAATTCTACTCACACACTTGGTCGGCGTAAAAAGCAAGCCTTTGTTTCTGTTTGATGCTTCAACTCAACAAGCACCCTTCAAGCAGTCTTCCACAGTAGCTGATGAACAAGAAAGAATTCAAGGCATATCAAAACATGCTTTTGACTCTACACAGGGGAATGAAAGGAAAACTATGTTGAAATCAAAGGAAAAAGGGTACAAAGAAGCATTGAGGGGACTGAGCAGATTAGGATCAACACCACCAAGGTGTGAGCACAAGTGTGGAGGCTGTATTCCCTGTGATCCTATTCAAATTCCTACCAACAATGATCTTCTGGGTACTCAGTATGCCAATTACGAGCCTGAAGGATGGAAGTGCAAATGTGGCAATGCTTATTTCAATCCATGA 486 0.4177 MDLSTLTTPFGINPFRMSTTVKTRRMCYILMASILLTHLVGVKSKPLFLFDASTQQAPFKQSSTVADEQERIQGISKHAFDSTQGNERKTMLKSKEKGYKEALRGLSRLGSTPPRCEHKCGGCIPCDPIQIPTNNDLLGTQYANYEPEGWKCKCGNAYFNP* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0296 161 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 6 84 161 - -
Vra5g0296 161 Pfam Epidermal patterning factor proteins 108 161 - -
Vra5g0296 161 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 84 161 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0296 Vra-Chr5 2807227 2809817 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0296 - - vra:106760068 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0296 5 2807227 2809817 Vra5g0296 5 2807227 2809817 ECH