Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0294 ATGGCGATCTCCGACGCGCCTGAAAGCGTAGGCACCGCCACCGGTCAAACCGACTCAGATCTCAGACTGCTTTCTCTGCGGCACAGGTCCAGCGCCACCTCCCCGGCCAGCTTCTTCGATGCCGAAGTCGCCGCCAGAGCTTCTGGCTCCCAGGAATCCTTGAACAACAAAAACGTCGAGGACAATAAAGATTGCAAGTCCAATCATGCAGCCTCCGATCATAATATTGTCAACAATGACGCTCGGAAAGAGCACGGAGAACAAGTCATCGATGTCAAATACGCTTACCGTCCCTCCGTTCCTGCTCACCGCAGAATCAAGGAGAGCCCGCTCAGCTCCGATAACATTTTCAGACAGAGTCACGCAGGACTGTTCAATCTCTGTATAGTAGTTCTTGTTGCGGTGAACAGCAGACTTATCATTGAGAACTTAATGAAGTATGGTTGGTTAATTAAGTATGGCTTTTGGTTTAGTTCAAAATCATTGAGAGATTGGCCCCTCTTCATGTGCTGTCTTAGTCTTAACATATTTCCACTTGCTGCCTTTATAGTGGAAAGGTTGGCACAGCAAAAGTATATTTCTGAACGGGTTGTTGTTTTACTTCATCTAGTTATCTCAACTGTTGAATTATCCTACCCAGTTTTAGTAATACTCAGGTGTGATTCAGCTTTTGTATCCGGTGTCACGTTGATGCTATTTACTTGCATTGTGTGGTTAAAATTGGTGTCATATGCCCATACAAACTATGACATGAGAGCACTTGCTGTTTCAAAAGAAAAGGGAGAAACATTACCCAATACTTTGATTATGGAGCATCCATATACTGTGACGATTGGGAGTTTGGCATACTTCATGGTTGCACCTACATTGTGCTATCAGACAAGCTATCCTCGCACCCCTTCTGTTCGAAAGGGTTGGGTGTTTCGTCAACTTGTCAAGCTGATAATATTTACTGGAGTAATGGGATTTATAATAGAGCAATATATGAATCCAATTGTACAAAATTCACATCATCCTTTGAAAGGAAACCTTCTATATGCCATTGAAAGAATACTGAAGCTTTCTGTTCCCAATGTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCATCTTTGGTTAAATATACTTGCAGAGCTTTTCCGATTTGGTGATCGTGAGTTCTATAAAGATTGGTGGAATGCAAGAACTGTTGAAGAGTATTGGAGGATGTGGAATATGCCTGTGCACAAATGGATGGTTCGCCACATATATTTTCCGTGCATAAGGAATGGTATACCCAAGGGTGGTGCTTCATTAATTGCCTTCCTGGTTTCTGCTGTTTTTCATGAGTTATGCATTGCCGTTCCTTGCCACGTGTTCAAGTTGTGGGCATTTATAGGAATTATGTTTCAGGTTCCATTGGTCTGGATCACTAATTACCTGCAAAACAAGTACAGGAACTCAATGGTTGGAAATATGATCTTTTGGTTCATATTTTGTATTCTTGGTCAACCTATGAGCGTACTATTATACTACCATGACTTGATGAATAGAAAAGGAGAAGTTGACTAA 1554 0.4215 MAISDAPESVGTATGQTDSDLRLLSLRHRSSATSPASFFDAEVAARASGSQESLNNKNVEDNKDCKSNHAASDHNIVNNDARKEHGEQVIDVKYAYRPSVPAHRRIKESPLSSDNIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKYGFWFSSKSLRDWPLFMCCLSLNIFPLAAFIVERLAQQKYISERVVVLLHLVISTVELSYPVLVILRCDSAFVSGVTLMLFTCIVWLKLVSYAHTNYDMRALAVSKEKGETLPNTLIMEHPYTVTIGSLAYFMVAPTLCYQTSYPRTPSVRKGWVFRQLVKLIIFTGVMGFIIEQYMNPIVQNSHHPLKGNLLYAIERILKLSVPNVYVWLCMFYCFFHLWLNILAELFRFGDREFYKDWWNARTVEEYWRMWNMPVHKWMVRHIYFPCIRNGIPKGGASLIAFLVSAVFHELCIAVPCHVFKLWAFIGIMFQVPLVWITNYLQNKYRNSMVGNMIFWFIFCILGQPMSVLLYYHDLMNRKGEVD* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0294 517 MobiDBLite consensus disorder prediction 49 73 - -
Vra5g0294 517 Pfam MBOAT, membrane-bound O-acyltransferase family 225 500 IPR004299 -
Vra5g0294 517 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 1C 17 517 - -
Vra5g0294 517 PIRSF Oat_dag 9 517 IPR027251 GO:0004144|GO:0019432
Vra5g0294 517 MobiDBLite consensus disorder prediction 57 73 - -
Vra5g0294 517 PIRSF Oat_ACAT_DAG_ARE 9 517 IPR014371 GO:0008374
Vra5g0294 517 PANTHER STEROL O-ACYLTRANSFERASE 17 517 IPR014371 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0294 Vra-Chr5 2780539 2793399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0294 91 516 Lipid Metabolism Gene Families AT2G19450 76.526 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0294 K11155 - gmx:547982 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0294 5 2780539 2793399 Vra5g0294 5 2780539 2793399 ECH
Vra7g2582 7 46099534 46109609 Vra5g0294 5 2780539 2793399 PCT