Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0287 ATGGCAAGTCCAGATAGACAATTGTACTCTGGGCAACGTGGATCCCACATAGCTCCTTCATTAGATAGATCAGGTAGCTTTCGTGAAAGCATGGAAAATCCAATTCTGTCTTCTCTTCCAAATATTTCAAGAAGCAGTTCTCCTGCAACTCAAGGGGATGTGGTGAGCTTCTTCAATTGTGTGCGTTTTAATCTAAAGTTGGTGGCTCCAGAGCATAAGTCTAATCGTCAAACAGATTATAAACGACTTGTCAGTGCTGCTCTTGGAATTTCTTCTGATGAATCTCCATCTAGTTCTGCCAAAGGCAAACAACTATCATCCCCAGCACCTGAAGATATCAAACGGTTGAGGGATAGTTTGCATGCAAGTTTTAGGAGGGCAAGGGATCGTGCTAAAATGTTTAGCGAAGCCCTGTCTAGATTCAACAAAGATTTCCAAAATATAACATCAAAGAAAAGGTCTCGAGCTGAAACTTTTTCTAATGAACGTTCTAGTTTTACATTAAGTGATCGATCAGTCTTGGGAACAAGCACAGGTAAGGTTGGAGTTCAAAGTCATGCAGTCACAGGTGGTTTTGAACATGACCAGCTGAAGTTGGAAGAAAGAACCAAAGTTGTTCCTAACAAGCGGACTCGAACTTCTTTGGTTGATGTAAGGATGGATATACGGACTAATTCTCTTGTCAGGCCATCTGGAACTGTAGATAGGGATAAAGAAATGTTAAGGATTGTCAATAGTAGTGCAGTGCAGGGTGAGGAACGAACTTTACCCATTGGAGGTGATGGGTGGGAAAAGTCAAAAATGAAGAAGAAACGTTCTGGCATCAAACCAGATGGGTCTCCAAATACAGCATTGACAAAGCCTATTAACCTTTTCCAGGAAACTAAACACGGAATGCAACAAAGACTAGCCAACGATGCTCGTGCAAAATTGAGTAATGATTCTCATTCTTTCAGGTCGGGAGTGACTAATGGAATTGTTGGAGCTGGAAAATCAGATGGCGTCTCTCAACAGACAGGGTTGGGCATACGCGTCTCTACTCCAAGAAGCGACCTAGAAAATAATTCTCCTGTCAATGATAGACGGGATCGTCCTGTCAGTTCAGACAAGGAAAGGGTGAATTTCAGAGCTGTTAACAAGGCAACTGTTCGTGATGAATTCAATTCGGCAAGTCCTAATTCAGGTGCAAAAATGAATACACCTATTCGGGCACCACGATCTGGTTCAGGAGTAGCTCCAAAGTCATCACCAGGTGTCATTAGAGCAGCTGTCCCTAATGATTGGGAGCCATCACATTGTATGACCAAGCCCCCTACCAGTGTTGGCACCAACAATCGCAAGCGAATGGCATCAGCACGATCATCTTCCCCACCTGTTGTCCACTGGCAGAGGCCACAGAAGAGCTCCCGTACGGCTAGGAGAGCAAATTTTGTGTCCACTGTGTCAAGTATTGATGATTCCCCTGTTTTGGACACTGTGTCAGATGTGTCTGGTAATGATCTTGGGTTGGGATTTGTTAGACGTTTGGCTGGTAATTCTCCTCAGCAAATTAAATTAAAAGGTGATTCTTTACCTTCAGCCGCCTTATCTGAAAGTGAAGAGTCAGGGGTGGCTGAGATAAAACCAAAAGAGAAGGGCAGGAAATCAGCGGAGATAGATCAGAAACCTGGACAAAATGTTCAAAAGGTTTCTAACTTCATCCTTCCCTCAAGAAAAAGTAAGCTTGTTTCTGCAGAAGAACATGGAGATGGTGTTAGGAGGCAGGGTAGGACAGGACGCAATTTTCCTGTTGCAAGGTCGCCAACACCAACGACATCTGAGAAGCTTGGAAATGTAGGAACTGTAAAGCAACTTAGAAGTTCAAGACTAGGACTTGAGAAGAGTGAAAGGGCAGGCCGTCCACCAACCAGGAAACTCTCTGATCGTAAGGCATATGCTCGTCAGAAACATACTGCACTTAGTTCATCAGCAGATTTTCTTGTTGGGTCGGGAGATGGACATGAAGAATTACTGGCTGCTGTAAAGGGTGTTATCAACTCTGCTCGTTCTTTTTCCAGCCAATTCTGGAGGCAGATGGAGCTTTTCTTTGGTTTAATAACTGAGGAGGATATTGCTTACTGGAAGCAGAAGATAAATCATGAATCAAGTGGATTGATGCCAACTCCAGTTCGTACATATGTAGATGGTTGTGAAGCTATTGCTAATGGGTTTGGGTTAATGGGTCATGGAAGAGATTTTGAACCTTGTAATCAAATGGGTGCTGGAGTTGTAGCAGAACAGTTACATCTAGCTAAAGGAGATTCCAATGGAATTCCCCTCTGTCAAAGGCTTATATCTGCTTTAATTTCAGAGGAGTGTAGCAGTGAAAGTGAAGATATAAAGTTTGATGCATGTGATGCTGAATTTGAGGCTGATGGAGAGTTGGATTTGAGTAGTTTGGATGACAGTTCTCGATCTAATTCTTATCTTGCTTGTTATTCTGCTTACAATGGTTATAGAATAACTAGAACATCAGGACATGATGAGACTGAAAGTGATAAAGTTGATATCCCATCAACTGGGTTGAATTCAAGCCAGAACATGCCTACTGTGACCTGTTCAGAGTTGCAATATGCCACCTTGGGTATGAATGAAAAGCTTCTTTTGGAGCTTCAAAGTATTGGAATTTCACCAGAATCAGTGCCTGAAATGTTGCAAGCAAATGATGAAGGAATTTGTGAGAATATCACCAGGTTAGAGGAGCATTACCAAGGACAGATGTCCAAGAGGAACTGCCTACTGGATGGATTATTACGATCTGCATCAGTGACAAAAGAAGTTCAAGAAAAGGATTTTGAACAAAATGCTCTTGACAAACTCCTCATGATGGCTTATGAGAAATACATGGCTTGTCGGGGTCCCAGCTCATCAGGTGGGAAGAATGCAAGCAACAAAATGGCCAAGCAAGCTGCATTGGGATTTGTTAAACGAACGTTGGAACGATGCCAACAATTTGAAGATACAGGCAAGAGCTGCTTCAGCGAGCCTTTGTATAAGGATATGTTCCTCGCTGCTTCCTCCCAGCTAAGTATTGTTCGAGAATTAGATGGCATGGAGGCTGAGTCCGTTAAACCTTCTGCTTCTTCCTTTTTTCTGGAAGCAAGAAATGGTTCCATGGGTTCACAGCAGAACCCTTCACAATTTAGTCAGAATGTGAAAGATCATGATTTCAATTCATCAGATATTCGTCATGCTGTAAATGGTTCCTCTGAACAGGCTAGTGGGAAGGAAGATCTTTGGTCAAACAGGGTGAAGAAAAGGGAATTGTCCCTTGATGATGTTGGCAGTACCATGGGGAGTTCAAGTGCTCCATCAGGCATTGGGGGTTCTCTATCAAATAGTACAAAAGGAAAGAGAAGTGAGAGAGACAGGGACGGAAAAGGGTATAGCAGAGAAGTGCCATCCAGAAATGGTACTACTAAAGTTGGTAGGCCAGCATTATCTAGTGCTAAGGGAGAAAGGAAACCAAAATCAAAACCTAAGCAGAAAGCAACTAAGCATTCTGTTTCTGTAAATGGCCTCCTTGGCAAGCTATCAGAGCAACCTAAGTCAAAGTCTAATGAAATGTCTAATAATATGAAGAGCAAGGAGAAAGATGAGTTTGGCATTGGTGAATATGATGACCATGAGCCTATTGATTTGTCCAACCTTCAATTACCTGGAATGGATGTACTTGGTGTTCCTGATGATCTCGGTGACCAAGGTCAGGATATTGGTTCATGGTTGAATATCGATGATGATGGATTGCAAGATCAGGATTTTATGGGGCTTGAAATTCCCATGGATGATCTTTCAGACTTGAATATGATGGTTTGA 3855 0.4259 MASPDRQLYSGQRGSHIAPSLDRSGSFRESMENPILSSLPNISRSSSPATQGDVVSFFNCVRFNLKLVAPEHKSNRQTDYKRLVSAALGISSDESPSSSAKGKQLSSPAPEDIKRLRDSLHASFRRARDRAKMFSEALSRFNKDFQNITSKKRSRAETFSNERSSFTLSDRSVLGTSTGKVGVQSHAVTGGFEHDQLKLEERTKVVPNKRTRTSLVDVRMDIRTNSLVRPSGTVDRDKEMLRIVNSSAVQGEERTLPIGGDGWEKSKMKKKRSGIKPDGSPNTALTKPINLFQETKHGMQQRLANDARAKLSNDSHSFRSGVTNGIVGAGKSDGVSQQTGLGIRVSTPRSDLENNSPVNDRRDRPVSSDKERVNFRAVNKATVRDEFNSASPNSGAKMNTPIRAPRSGSGVAPKSSPGVIRAAVPNDWEPSHCMTKPPTSVGTNNRKRMASARSSSPPVVHWQRPQKSSRTARRANFVSTVSSIDDSPVLDTVSDVSGNDLGLGFVRRLAGNSPQQIKLKGDSLPSAALSESEESGVAEIKPKEKGRKSAEIDQKPGQNVQKVSNFILPSRKSKLVSAEEHGDGVRRQGRTGRNFPVARSPTPTTSEKLGNVGTVKQLRSSRLGLEKSERAGRPPTRKLSDRKAYARQKHTALSSSADFLVGSGDGHEELLAAVKGVINSARSFSSQFWRQMELFFGLITEEDIAYWKQKINHESSGLMPTPVRTYVDGCEAIANGFGLMGHGRDFEPCNQMGAGVVAEQLHLAKGDSNGIPLCQRLISALISEECSSESEDIKFDACDAEFEADGELDLSSLDDSSRSNSYLACYSAYNGYRITRTSGHDETESDKVDIPSTGLNSSQNMPTVTCSELQYATLGMNEKLLLELQSIGISPESVPEMLQANDEGICENITRLEEHYQGQMSKRNCLLDGLLRSASVTKEVQEKDFEQNALDKLLMMAYEKYMACRGPSSSGGKNASNKMAKQAALGFVKRTLERCQQFEDTGKSCFSEPLYKDMFLAASSQLSIVRELDGMEAESVKPSASSFFLEARNGSMGSQQNPSQFSQNVKDHDFNSSDIRHAVNGSSEQASGKEDLWSNRVKKRELSLDDVGSTMGSSSAPSGIGGSLSNSTKGKRSERDRDGKGYSREVPSRNGTTKVGRPALSSAKGERKPKSKPKQKATKHSVSVNGLLGKLSEQPKSKSNEMSNNMKSKEKDEFGIGEYDDHEPIDLSNLQLPGMDVLGVPDDLGDQGQDIGSWLNIDDDGLQDQDFMGLEIPMDDLSDLNMMV* 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0287 1284 PANTHER OS05G0107300 PROTEIN 2 1284 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 520 557 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 574 609 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 330 354 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 1075 1090 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 837 859 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 1091 1105 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 1073 1209 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 574 588 - -
Vra5g0287 1284 PANTHER PLANT/F27B13-30 PROTEIN 2 1284 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 329 370 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 254 286 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 1129 1144 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 1049 1068 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 1107 1128 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 595 609 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 91 111 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 387 470 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 355 370 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 1178 1202 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 91 105 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 1 19 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 258 276 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 536 552 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 622 643 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 436 470 - -
Vra5g0287 1284 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0287 Vra-Chr5 2694081 2707370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0287 - - gmx:100812435 2108.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0287 5 2694081 2707370 Vra5g0287 5 2694081 2707370 ECH
Vra7g2590 7 46173445 46185965 Vra5g0287 5 2694081 2707370 PCT