Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0271 ATGGAGGGTGACACATTCTCTGGCCTTGCCAATGGTGCTCAGATTGATGCCAACATCATGCAGACATTTCACAAGAGCTTTGTTCAAGTTCAGAGCATCTTTGATCAGAACAGGCTACTCATCAATGAGATAAACCAGAACCATGAGTCTAAGGTCCCTGATAACCTCACCAGGAATGTAGGTCTCATTAGGGAGCTCAACAACAATATCAGAAGAGTGTATGACCTATATGCTGATCTTTCAAGTTCCTTTACCAAATCCATGGAAGTTACTTCAGAGGGGGATTCCAGTGGTGGTGTGAAATCAGATGGGAAGGCAGGCCACAAGAGACACAGGCCTGTGTAG 345 0.4522 MEGDTFSGLANGAQIDANIMQTFHKSFVQVQSIFDQNRLLINEINQNHESKVPDNLTRNVGLIRELNNNIRRVYDLYADLSSSFTKSMEVTSEGDSSGGVKSDGKAGHKRHRPV* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0271 114 MobiDBLite consensus disorder prediction 88 114 - -
Vra5g0271 114 PANTHER PROTEIN ELF4-LIKE 4 1 113 IPR040462 GO:0042753
Vra5g0271 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Vra5g0271 114 PANTHER PROTEIN ELF4-LIKE 3 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0271 Vra-Chr5 2531530 2533466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0271 - - ccaj:109808760 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0271 5 2531530 2533466 Vra5g0271 5 2531530 2533466 ECH
Vra7g2607 7 46328132 46331428 Vra5g0271 5 2531530 2533466 PCT