Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0255 ATGATGCCTGTTATTAGCAAAATGTACTGTTCATCTTCTCAGATGGTGCTTGGGGTCAGAAGAAGGCCACATGTGGTGAATGGAGGGGGATTGGTAGTCACGGATTGTAGTGCCCAAAGGGTTGTTTTCAAGGTTGATGGCTGTGGAATTCATGGCACAAAGGAACAGTTGATTCTAAGAGATGGTGAAGGAGATGCTTTACTTCTCATGCGTCGAAAGGGAGGCATGATTGAGGCCCTTAGCATTTACAAGAAGTGGAAAGGATATAGCATGAACTATGAAGGATCACGGACCCTGGTTTTCAGCTTGAAAGAACCGAATTCTTGTTTTGTCAGGAACAATGGGATTAGAATCTCCATTGAGCCCAGAGCTGCAAGTAACAAAGGCTGGGACTTTGAGATCAGGGGTTACTTCCCTGATAGGAATTGTAGCATTGTTGACATTAGGGGCAACGTTATTGCCCAGGTTGGGGTGAATAAAGAAGTGGAGAAATTGATGGAAACCAAGGATCTGTACAATGTGGTCGTGAAACCTGGGATGGATCAAGCCTTTGTTTTTGGAGTCATCGCAGTTCTTGACTACATTTATGGAGAATCCACCTACTGCTAA 609 0.4433 MMPVISKMYCSSSQMVLGVRRRPHVVNGGGLVVTDCSAQRVVFKVDGCGIHGTKEQLILRDGEGDALLLMRRKGGMIEALSIYKKWKGYSMNYEGSRTLVFSLKEPNSCFVRNNGIRISIEPRAASNKGWDFEIRGYFPDRNCSIVDIRGNVIAQVGVNKEVEKLMETKDLYNVVVKPGMDQAFVFGVIAVLDYIYGESTYC* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0255 202 Gene3D - 3 200 IPR038595 -
Vra5g0255 202 Pfam LURP-one-related 4 191 IPR007612 -
Vra5g0255 202 PANTHER - 3 201 IPR007612 -
Vra5g0255 202 PANTHER PROTEIN LURP-ONE-RELATED 6 3 201 - -
Vra5g0255 202 SUPERFAMILY Tubby C-terminal domain-like 2 196 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0255 Vra-Chr5 2327636 2329060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0255 - - gmx:100817988 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0255 5 2327636 2329060 Vra5g0255 5 2327636 2329060 ECH
Vra7g2630 7 46554259 46555337 Vra5g0255 5 2327636 2329060 PCT