Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0252 ATGGCTTCCTTAGTAAGAGTCTTCTCAAGCTTCTTTCTAGCAGTTTTACTGTCTCTCACAGTTCAAATCCTTTTCTTCTCACCCATTGATCCACTTTTGCTTGATCTAAAACCTTCCACAACAACCGGAGACAACAAATTACAGAACATCATTAAACTTGGAGATGGACATGTGAAGGAACCAGAAGATCTTTGTGTGGATAAAGAAGGGACTATGTATACTGCTACTCGAGATGGTTGGATCAAACGAATGCACAGAAATGGAAATTGGGAGAATTGGAAGCATATCGGTGGTGATACCTTGATAGGAGTCACCGAATCTAAAGAAGGTGGTATCATTGTTTGCGACTCTGCCAGGGGTTTGCTGAGGGTTAGAGAAGATGGTATCAGTGTTCTCACTTCAGAAGCTAATGATGGTTCTAAAATAAGGTTTGCAGATGATGCAATAGAAGACTGGGATGGGAATGTGTATTTCAGCATTGTGAGTACGAAATTTGATATGCATCATTGGCATCTGGATTTCTTAGAGGCAAGACCTCACGGACAACTTTTCAAGTACACTGCAAAATCCAACGAATCTGTTCTTCTTCTCGATAATCTTGCCTTTGCTAATGGAGTTGCACTCTCCAAAGACCAAGATTTTCTTTTGATCTGTGAAACTTGGAGATATAGGTGTCTGAGGTATTGGTTAAAAGGAGAAAAGAAAGGCAAAACAGATATTTTCGTAGAAAACCTTCCTGGTGCACCTGATAATATCAATCTTGCTCCTGATGGATCCTTCTGGATCGGTTTGATTCAGTTGAATTCTGAAAGGCTGGAGTTTATGTACAAGTACAAGATAACGAAGCATCTGCTAGCTGCATCTCCAAGACTGTTTAACTTTGTGGCTGATCTGAAGAGAAGAGCAAGGGTGGTGAATGTGGGAACTGATGGGAAGATAATTAGGAAGTTTGAAGATGGTGATGGGAAGGTCATTAATTTTGTCACTTCAGCTTTGGAGTTTGAGGAGCATCTTTACTTGGGTAGTCTTAGTTCAAACTTTGTTGGAAAATTACCACTGCATGCTGCATAG 1071 0.4043 MASLVRVFSSFFLAVLLSLTVQILFFSPIDPLLLDLKPSTTTGDNKLQNIIKLGDGHVKEPEDLCVDKEGTMYTATRDGWIKRMHRNGNWENWKHIGGDTLIGVTESKEGGIIVCDSARGLLRVREDGISVLTSEANDGSKIRFADDAIEDWDGNVYFSIVSTKFDMHHWHLDFLEARPHGQLFKYTAKSNESVLLLDNLAFANGVALSKDQDFLLICETWRYRCLRYWLKGEKKGKTDIFVENLPGAPDNINLAPDGSFWIGLIQLNSERLEFMYKYKITKHLLAASPRLFNFVADLKRRARVVNVGTDGKIIRKFEDGDGKVINFVTSALEFEEHLYLGSLSSNFVGKLPLHAA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0252 356 Pfam Strictosidine synthase-like, N-terminal 45 84 - -
Vra5g0252 356 PANTHER STRICTOSIDINE SYNTHASE-RELATED 9 354 - -
Vra5g0252 356 SUPERFAMILY Calcium-dependent phosphotriesterase 23 353 - -
Vra5g0252 356 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 9 354 - -
Vra5g0252 356 Pfam Strictosidine synthase 149 233 IPR018119 GO:0009058|GO:0016844
Vra5g0252 356 Gene3D - 44 355 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0252 Vra-Chr5 2296241 2300416 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0252 - - gmx:100798788 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0252 5 2296241 2300416 Vra5g0252 5 2296241 2300416 ECH