Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0249 ATGAAGGTGGGCTTCTATGGCTTGAAGGGTAAAGAAATTTCCCTTATTTCCATTATTCTGGTGTCCACAACGTTCATTATATGGTCATGGGAGAGAGCACCTGGTCGTGCTTCATTTGTTTCCTCTCAAACATTGATGCATTTTTCTTCAGAAATGCTTTCCAGTGTGTTAGATGAGTATGATAGCAGCGGAGAAGTAGGCATCGGTTTGAATAATGCCACAGAAAACGAAGTATGTAACCTTGCAAAAGGAAAATGGGTTCCAGACAACCGCCAACCTTTATATTCAGGTTTTGAATGCAAGCAATGGCTGTCAGAGATGTGGGCCTGCCGCTTGACACAACGCACAGATTTTGCATATGAAAGGCTTCGATGGCAGCCAAAAGATTGTCAAATGGAGGAATTTGAAGGGTCTAAATTTTTGAGAAGGATGCAACACAAAACTATAGCCTTTGTTGGAGACTCATTGGGTCGGCAGCAGTTTCAGTCTCTAATGTGCATGATCACTGCTGGGAAGGAAACGCTTGATGTGGAATATGTGGGGAAGGAGTATGGGCTGATTCTATCTGAGGGTGCCGCTCGCCCTGATGGATGGGCTTATCGGTTTTTGAGCACCAATACTACAATTCTCTACTACTGGTCTGCAATTCTCTGTGATATTGAACCTATCAATGTCGATGATCCAGCAACAGAATATGCTATACATCTTGACCGGCCTCCGCAGTTCTTGCGCCAATTCCTTCGCAGTTTTAACGTTCTGGTTCTCAATACAGGTCACCATTGGAATCGAGGAAAGATCAATGCTAATAGGTGGATAATGCATGTTGGAGGTGTGCCAAATACTGACAAGAAGATAGCTGTGGTTGCGGGTGCCAAGAATCTCACTGTTCACAGTGTGGTTAGGTGGGTGAGCTCGCAGCTTTTAGAGTATCCTAGTTTAAAGGTATTCTTTCGGACCATTTCCCCAAGGCATTTTGTTGGTGGGGACTGGAACACTGGAGGCAGCTGTAACAGCACTACACCAATGTCAGTGGGAAAGGAAATATTGGGTGAAGAGTCTACAGATAAAGTTGTAGCCGATGCAGTGAAGGGAACAAGGGTCAAGATCTTGGACATAACAGCTCTTTCTCAGCTTAGGGATGAAGGTCATATATCACATTTTAGCATTTCGGCCAAGCCAGGTGTGCAGGATTGCTTACACTGGTGTTTGCCTGGCATTCCTGATACGTGGAATGAAATACTCTTTACACAAATCTAG 1257 0.4439 MKVGFYGLKGKEISLISIILVSTTFIIWSWERAPGRASFVSSQTLMHFSSEMLSSVLDEYDSSGEVGIGLNNATENEVCNLAKGKWVPDNRQPLYSGFECKQWLSEMWACRLTQRTDFAYERLRWQPKDCQMEEFEGSKFLRRMQHKTIAFVGDSLGRQQFQSLMCMITAGKETLDVEYVGKEYGLILSEGAARPDGWAYRFLSTNTTILYYWSAILCDIEPINVDDPATEYAIHLDRPPQFLRQFLRSFNVLVLNTGHHWNRGKINANRWIMHVGGVPNTDKKIAVVAGAKNLTVHSVVRWVSSQLLEYPSLKVFFRTISPRHFVGGDWNTGGSCNSTTPMSVGKEILGEESTDKVVADAVKGTRVKILDITALSQLRDEGHISHFSISAKPGVQDCLHWCLPGIPDTWNEILFTQI* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0249 418 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 4 49 - -
Vra5g0249 418 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 71 418 - -
Vra5g0249 418 Pfam PMR5 N terminal Domain 78 131 IPR025846 -
Vra5g0249 418 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 134 416 IPR026057 GO:0016740
Vra5g0249 418 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 71 418 - -
Vra5g0249 418 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 4 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0249 Vra-Chr5 2277820 2282188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0249 - - vra:106759990 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2632 7 46568696 46573493 Vra5g0249 5 2277820 2282188 PCT