Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0248 ATGGTAGAGGAATTCTCCAAATCGGTGGAGGAGGGGCTCCGCCTCTCTAAGAGAATATACTTCGGCAAAGACCGCGCCGTCTCGCCGCCCAAACCTCCACCAACCATGTCCAAGTCCAACACCTCCTACCTCCCCACCGCTCCCATGCTCTACGCCGTCATTCACAATCCTGCTATCGTCGACAACCCCGACGTTCCAAGCTATCAGCCTTACGTCCACGGAAAGTGCGACCCGCCCGCGCTCATTCCTCTTCACATGACCGCCGTTCACCTTCAAGCGCAATGCTATCTCCACGCCGCCGCCTTCCTCACCCTCTCCGCCACGTTCCGACTCCACTGCGTCTCCGGCAGCCGCTTCTGCGATTGCATCGTCGCTGTTCCCGTCCCACATCAGGGTTCAATTCTAGGTGTGGAAGTCAGTGTTCATAGGAAGTCTTATTCTACTCTGCTGGTTGATATGAAAGACAAAGATGGTGAGAAGAATATGATCCGATGTCAAGATGGAGGCTTTATCGGGCCTAATTTGTTTACCTTGCATATACCTCAGATAGACGGAGGTTCCAAATTATCTGTTAAATTTAGTTGGTACCAGAAGATACTATACAGCAATGATGAGTTCCTCTTAAATGTGCCGTTTACCTTTCCTGATTTTATCAACCCTGTTGGGAAAATGTCAAAAAAAGAAAAGATAGAAATAACTGTGAATGCTATAGCTGGAAGTGAGCATCTTTACCATAAAACGAGTCACCCCATGAAGACAGTGAGGAACAATGCTGGGAGTACGGGTTTCTTGTATGAGGCAGATGTTCTCTCGTGGTCAAAAACTGATTTTAGCTTTTCATATGTTATGCCTGATTCTTCAAGTCATATAAGTGGTGGGGTTCTCTTGGAATCTGCACCAGTGGATGACTTTGATCAAAGAGATATGTTCTGCATGTACCTTCATCCAGGAAATCTTCAGAGTAAGAAGATATTCAGAAAGGACATCGTATTTGTAATTGACGTCAGTGGAAGCATGCGGGGAAAGCTAATTGATGAAACAAAAAATGCACTATCTGTTGCTCTCTCTAAGCTCGATCCTGACGATTCATTTAGTATTATAGCATTTAATGGAGATATATACCAATTTTCAAAATCCATGGAATTGGCTTCAAAGGATGCTGTTGAAAGGGCCATAGAGTGGATTAACATAAACTTTGTTGCAGGGGGTGATACGAATATTTTGCATCCTTTAAACACGGCAATAGAGATGCTATCTGATGCTCAAAGTTCAGTTCCAATTATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAGAGACAAATCTGTGATGTGATAAAGAATCATGTGACCAATGGAGAGTCAATGTCCCCACGAATTTATACTTTTGGCATAGGTCCATTCTGCAATAATTATTTCTTGCGGATGCTTGCTACGATAAGTCGGGGCCAACATTTTGCAGCATTGGATGCAGATTTGGTCGAGTCTCAAATGCTGCAATTCTTCCACAAAGCTTCATCTATTGTTCTTGCAAATATCACAGCAGACATATTCAATGGTCTGAATGAAGTTGAGGTGTGCCCCTTCCATATTCCAGATCTTTCCTCAGATGGTCCAATGATTTTATCTGGAAGATTCAATGGCAGTTTTCCCAAAGATCTTGAAATTAAAGGGGTCTTGGCTGATTTCAGTAATTTTGTAATAGATATGAAGATTGAAGAGGCTAAGGACATACCTCTACAAAGGATTTGTGCAAGGGACCAAATAGAGTATCTTACTGCTCAAGCTTGGCTCTCAAAAGATGAAAAATTAGAACAGCGGGTTGCAAAACTAAGCTTACAAACGGGTTTTATATCCGAGTACACACTTATGGCAAATCTTGAGAATGATCTTCGAAAGAATGTCAAGGAATCAGATAGAAAGAAAGAAGTGTCAAAAAAGAGCCATCATAAGAAGGCTGGTGCAAAAGAACAAGGGAACCGAATATTTTTGCTCCCTCACTTAGGTATAGGATTTGGGAACTTGGCTGCAACTGCTGAAAACATTCAGCCGGGACGACATGAACCAAAAGGGCCTGATGCGGCTGAAATCTTTGTTAAACGGGCAACGAATTGTTGTAGCTCCTGCTGCAACAATTCCTGCTGTTGCATGGCCTGCATTCATACCTGTACCCGGATAAACAGCGAATGTGCAAATGCAATTACTCAACTCTGCGTTGGATTGGGATGCTTCAGCTGCCTTGAATGTTGTGCAGATATATGCTGTTCTGGAAATGAAAACTGA 2283 0.4319 MVEEFSKSVEEGLRLSKRIYFGKDRAVSPPKPPPTMSKSNTSYLPTAPMLYAVIHNPAIVDNPDVPSYQPYVHGKCDPPALIPLHMTAVHLQAQCYLHAAAFLTLSATFRLHCVSGSRFCDCIVAVPVPHQGSILGVEVSVHRKSYSTLLVDMKDKDGEKNMIRCQDGGFIGPNLFTLHIPQIDGGSKLSVKFSWYQKILYSNDEFLLNVPFTFPDFINPVGKMSKKEKIEITVNAIAGSEHLYHKTSHPMKTVRNNAGSTGFLYEADVLSWSKTDFSFSYVMPDSSSHISGGVLLESAPVDDFDQRDMFCMYLHPGNLQSKKIFRKDIVFVIDVSGSMRGKLIDETKNALSVALSKLDPDDSFSIIAFNGDIYQFSKSMELASKDAVERAIEWININFVAGGDTNILHPLNTAIEMLSDAQSSVPIIFLVTDGTVEDERQICDVIKNHVTNGESMSPRIYTFGIGPFCNNYFLRMLATISRGQHFAALDADLVESQMLQFFHKASSIVLANITADIFNGLNEVEVCPFHIPDLSSDGPMILSGRFNGSFPKDLEIKGVLADFSNFVIDMKIEEAKDIPLQRICARDQIEYLTAQAWLSKDEKLEQRVAKLSLQTGFISEYTLMANLENDLRKNVKESDRKKEVSKKSHHKKAGAKEQGNRIFLLPHLGIGFGNLAATAENIQPGRHEPKGPDAAEIFVKRATNCCSSCCNNSCCCMACIHTCTRINSECANAITQLCVGLGCFSCLECCADICCSGNEN* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0248 760 CDD vWA_interalpha_trypsin_inhibitor 325 500 - -
Vra5g0248 760 Gene3D von Willebrand factor, type A domain 327 505 IPR036465 -
Vra5g0248 760 SMART VWA_4 326 506 IPR002035 -
Vra5g0248 760 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 759 - -
Vra5g0248 760 SUPERFAMILY vWA-like 327 497 IPR036465 -
Vra5g0248 760 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 759 - -
Vra5g0248 760 Pfam von Willebrand factor type A domain 328 488 IPR002035 -
Vra5g0248 760 MobiDBLite consensus disorder prediction 634 656 - -
Vra5g0248 760 ProSiteProfiles VWFA domain profile. 328 502 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0248 Vra-Chr5 2270304 2276718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0248 - - gmx:100820133 1217.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2633 7 46576714 46583249 Vra5g0248 5 2270304 2276718 PCT